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. 2015 Apr 14;16(7):685–698. doi: 10.1111/mpp.12227

Table 1.

Amino acid coordinates of methyl‐accepting chemotaxis protein (MCP) domains and transmembrane regions (TMs) determine the topology of the Dd3937 chemoreceptor

ID TM MCP Topology classc
ASAPa UNIPROTb i1 j1 i2 j2 i3 j3 i j
ABF‐0014536 E0SHS4 10 32 181 203 334 501 Ia
ABF‐0014618 E0SM30 36 58 214 232 367 531 Ia
ABF‐0014722 E0SF47 7 29 190 209 344 511 Ia
ABF‐0014824 E0SDP4 10 32 183 205 340 507 Ia
ABF‐0015168 E0SH41 5 24 177 199 335 501 Ia
ABF‐0015513 E0SBF1 20 42 200 222 360 523 Ia
ABF‐0015600 E0SE76 12 34 278 295 431 598 Ia
ABF‐0015603 E0SE77 38 60 300 317 451 618 Ia
ABF‐0016115 E0SN86 13 35 269 285 421 588 Ia
ABF‐0016585 E0SIA2 10 32 189 211 343 510 Ia
ABF‐0016979 E0SEW8 10 32 183 205 343 510 Ia
ABF‐0017097 E0SCJ7 17 39 272 290 427 593 Ia
ABF‐0017662 E0SFJ0 5 27 187 204 342 508 Ia
ABF‐0017665 E0SFJ2 36 58 213 235 372 538 Ia
ABF‐0017668 E0SFJ3 10 32 184 206 344 511 Ia
ABF‐0017672 E0SFJ4 10 32 184 206 347 514 Ia
ABF‐0017674 E0SFJ5 20 39 201 223 359 526 Ia
ABF‐0017863 E0SI11 10 32 189 211 346 510 Ia
ABF‐0017896 E0SHY9 11 33 178 200 337 503 Ia
ABF‐0018502 E0SEF0 10 32 187 209 346 512 Ia
ABF‐0018541 E0SFF6 10 32 182 204 336 505 Ia
ABF‐0018585 E0SJX6 20 42 199 221 357 524 Ia
ABF‐0018754 E0SIM4 10 32 179 201 336 503 Ia
ABF‐0018765 E0SIN3 20 42 204 226 356 518 Ia
ABF‐0018892 E0SJ51 20 42 194 216 355 522 Ia
ABF‐0019050 E0SAP6 15 37 270 292 427 591 Ia
ABF‐0019306 E0SF78 13 35 282 299 435 601 Ia
ABF‐0019718 E0SHT9 7 29 180 202 336 502 Ia
ABF‐0019790 E0SF98 10 32 187 209 344 510 Ia
ABF‐0019851 E0SM37 7 29 179 194 333 499 Ia
ABF‐0019852 E0SM36 20 42 195 214 348 515 Ia
ABF‐0019855 E0SM35 13 35 185 204 340 507 Ia
ABF‐0019858 E0SM34 31 53 202 222 357 522 Ia
ABF‐0020167 E0SDB0 10 29 178 200 340 507 Ia
ABF‐0020252 E0SF13 25 47 288 314 439 604 Ia
ABF‐0020431 E0SDX8 5 27 168 190 327 489 Ia
ABF‐0046680 E0SMA1 58 77 348 370 504 670 Ia
ABF‐0017537 E0SD21 10 32 142 147 421 586 Ia
ABF‐0017419 E0SJN1 138 160 295 462 Ib
ABF‐0014726 E0SF49 159 178 188 200 335 497 II
ABF‐0019309 E0SF75 164 181 186 205 341 506 II
ABF‐0014843 E0SDM9 147 151 165 180 185 196 337 499 III
ABF‐0016380 E0SEN9 30 52 183 205 336 350 490 656 III
ABF‐0018511 E0SEE2 13 30 196 203 315 330 468 633 III
ABF‐0016436 E0SMM7 297 417 IVa
ABF‐0017090 E0SCK2 474 615 IVa
ABF‐0017824 E0SI40 17 131 IVa
a

Nomenclature from the ASAP database (https://asap.ahabs.wisc.edu/asap/logon/php).

b

Nomenclature from the UNIPROT database (http://www.uniprot.org/).

c

Topology class according to Lacal et al. (2010a).