Table 1.
Accession code | Accession name | pvr2 allele | RB frequency (%) (n = 60)a | VA (n = 10)b | AUDPC (n = 20)b | Deletion in the pvr6 genec |
---|---|---|---|---|---|---|
PM1237 | Piment de Thaïlande | pvr23 | 0a | 0.001a | 55cd | No |
PM1123 | 276F | pvr23 | 0a | 0.006ab | 85gh | No |
PM1242 | G1 | pvr23 | 0a | 0.010bc | 78fg | No |
PM1614 | C69 | pvr23 | 0a | 0.063cde | 54c | No |
PM0834 | AC 1448 | pvr23 | 0a | 0.103def | 67de | No |
PM1238 | Piment Ile Maurice | pvr23 | 0a | 0.166efg | 72ef | No |
PM1060 | PI 123 474 | pvr23 | 0a | 0.173efg | 69de | No |
PM1430 | Pikuti | pvr23 | 0a | 0.202efg | 43b | No |
PM1525 | Ubud Bali 2 | pvr23 | 0a | 0.215bcdefg | 43b | No |
PM1491 | Copoya | pvr23 | 0a | 0.250efgh | 95h | No |
PM1014 | Bousso 2 | pvr23 | 0a | 0.269bcdefgh | 70de | No |
PM1564 | Beijin | pvr24 | 0a | 0.664gh | 61cd | No |
PM1400 | P 709 | pvr24 | 1.6a | 0.014cd | 35a | No |
PM1612 | Jaipur | pvr23 | 1.6a | 0.398efgh | 88gh | No |
PM0659 | Perennial | pvr23 | 1.6a | 0.406fgh | 41b | Nt 89 to 170 |
PM1067 | Huixtan | pvr23 | 1.6a | 0.416gh | 90h | No |
PM1487 | Souman Boucoule 3 | pvr23 | 3.3a | 0.142efg | 71e | No |
PM0687 | PI 322 719 | pvr24 | 5a | 1.010hi | 74ef | No |
PM0836 | PI 369 940 | pvr23 | 40b | 2.141i | 74ef | Nt 89 to 170 |
PM1243 | G4 | pvr24 | 52.5b | 2.804i | 75ef | Nt 89 to 170 |
Letters represent homogeneous groups identified by pairwise comparisons (Fisher exact tests at the 5% type‐I error threshold corresponding to a 0.00027 threshold after Bonferroni correction for multiple comparisons). RB frequency evaluated after inoculation with PVY CI chimera.
Letters represent homogeneous groups identified by pairwise comparisons (Wilcoxon tests at the 5% type‐I error threshold with Benjamini and Yekutieli correction). VA and AUDPC evaluated after inoculation with PVY CI chimera carrying the genome‐linked viral protein (VPg)‐N mutation.
In three accessions, an 82‐nucleotide (nt) deletion (from nucleotide 89 to 170) resulted in a premature stop codon and a truncated non‐functional eIFiso4E (Ruffel et al., 2006).