Table 2.
Natural virus resistance genes identified in Arabidopsis thaliana
| Virus (genus) | Strain(s) | Accession | Resistance phenotype | Gene(s) | Reference |
|---|---|---|---|---|---|
| RNA viruses | |||||
| SBLV (Bromovirus) | PV‐369 | Col | Tolerance | ssb1 | Fujisaki et al. (2004) |
| TCV (Carmovirus) | M | Di‐0 | No systemic movement | HRT+rrt | Cooley et al. (2000); Kachroo et al. (2000) |
| CMV (Cucumovirus) | Y | C24 | No systemic movement | RCY1 | Takahashi et al. (2002) |
| TRSV (Nepovirus) | Grape | Col | Tolerance | TTR1 | Lee et al. (1996) |
| LMV (Potyvirus) | AF199, 0, E | Cvi | No replication or no cell‐to‐cell movement | rlm1 | Revers et al. (2003) |
| 0 | Col | No replication or no cell‐to‐cell movement | LLM1 | Revers et al. (2003) | |
| AF199 | Col, Jea, N13, Ws‐2, Stw‐0, Ita‐0, Kn‐0 | No systemic movement | RTM1+RTM2+RTM3+RTM4+RTM5 | Cosson et al. (2012); Revers et al. (2003) | |
| PPV (Potyvirus) | PPV‐EA, PPV‐PSes, PPV‐SK68 | Col | No systemic movement | RTM1+RTM2+RTM3+RTM4+RTM5 | Decroocq et al. (2006, 2009) |
| PPV‐R | Col | Tolerance and reduced infection | Polygenic (several QTLs) | Decroocq et al., 2006; Sicard et al., 2008 | |
| PPV‐PS | Cvi | No systemic movement | rpv1 | Decroocq et al. (2006) | |
| PPV‐R | Cvi | Intermediate susceptibility | rpv1+rpv3+several QTLs | Sicard et al. (2008) | |
| PPV‐R | St‐0, RRS‐7, Ts‐1, Hi‐0, Sf‐2 | No systemic movement | sha3a | Pagny et al. (2012) | |
| TEV (Potyvirus) | HAT, Madison, ST1 | Col | No systemic movement | RTM1+RTM2+RTM3+RTM4+RTM5 | Chisholm et al. (2000); Cosson et al. (2010a); |
| Cosson et al. (2012); Whitham et al. (2000) | |||||
| TuMV (Potyvirus) | Azu, TuR1 | Ler | Vascular restriction | TuNI | Kaneko et al. (2004) |
| PlAMV (Potexvirus) | – | Bay‐0 | Reduced replication, no systemic movement | JAX1 | Yamaji et al. (2012) |
| TMV (Tobamovirus) | U1 | Tsu‐1 | Delayed and reduced infection | Monogenic, recessive | Dardick et al. (2000) |
| Col | Delayed infection | dstm1 | Serrano et al. (2008) | ||
| DNA viruses | |||||
| BCTV (Curtovirus) | Logan | Ms‐0 | No virus movement | Monogenic, recessive | Lee et al. (1994) |
| Pr‐0 | No virus movement | Monogenic, recessive | Lee et al. (1994) | ||
| CFH | Cen‐O | Tolerance | Monogenic, recessive | Park et al. (2002) | |
| CaMV (Caulimovirus) | CM4‐184, CM1841, W260 | En‐2 | Reduced infection | CAR1 | Callaway et al. (1996) |
a
sha3 was identified as a major effect resistance quantitative trait locus (QTL). One to two additional minor effect QTLs contributing to the resistance, sha1 and sha5, have been identified in St‐0, RRS‐7 and Ts‐1.
The cloned genes are in bold and underlined.
BCTV, Beet curly top virus; CaMV, Cauliflower mosaic virus; CMV, Cucumber mosaic virus; LMV, Lettuce mosaic virus; PlAMV, Plantago asiatica mosaic virus; PPV, Plum pox virus; SBLV, Spring beauty latent virus; TCV, Turnip crinkle virus; TEV, Tobacco etch virus; TMV, Tobacco mosaic virus; TRSV, Tobacco ringspot virus; TuMV, Turnip mosaic virus.