Table 1.
List of Pepino mosaic virus (PepMV) isolates used in this study
| Sample code* | Country of origin | Year of origin | Phenotype | Codon 155 | AA | Codon 166 | AA |
|---|---|---|---|---|---|---|---|
| P‐1‐IY | Poland | 2010 | IY | AAA | K | GAT | D |
| P‐3‐IY | Poland | 2010 | IY | AAA | K | GAT | D |
| P‐5‐IY | Poland | 2010 | IY | AAA | K | GAT | D |
| P‐22 | Poland | 2005 | No symptoms | GAA | E | GAT | D |
| B‐2212‐IY | Belgium | 2012 | IY | AAA | K | GAT | D |
| B‐2212‐YM | Belgium | 2012 | YM |
AAA GAA |
K E |
GAT | D |
| B‐2212‐NH | Belgium | 2012 | Mild NH | GAA | E | GAT | D |
| B‐2212‐IY‐GH | Belgium | 2012 | GH from recovered IY plant | GAA | E | GAT | D |
| B‐2212‐IY‐YM | Belgium | 2012 | Middle YM from ‘recovered’ IY plant |
AAA GAA |
K E |
GAT | D |
| B‐0111‐IY | Belgium | 2011 | IY | AAA | K | GAT | D |
| B‐1812‐IY | Belgium | 2012 | IY | AAA | K | GAT | D |
| B‐1012‐IY | Belgium | 2012 | IY | GAA | E | GGT | G |
| NL‐NS12‐IY | Netherlands | 2012 | IY | GAA | E | GGT | G |
| NL‐NS12‐IY‐GH | Netherlands | 2012 | GH from recovered IY plant | GAA | E | GAT | D |
| NL‐NS12‐IY‐YM | Netherlands | 2012 | Middle YM leaves from recovered IY plant | GAA | E |
GAT GGT |
D G |
| NL‐NS12‐IY‐IY | Netherlands | 2012 | Older, IY leaves from recovered IY plant | GAA | E | GGT | G |
| NL‐2411‐IY | Netherlands | 2011 | IY | GAA | E | GGT | G |
| NL‐9412‐IY | Netherlands | 2012 | IY | GAA | E | GGT | G |
| FR‐1911‐IY | France | 2011 | IY | GAA | E | GGT | G |
*Sample codes consist of: (i) a letter code which refers to the country of origin (B, Belgium; FR, France; NL, the Netherlands); (ii) a unique number code for the glasshouse; (iii) the year of isolation (not included for the Polish isolates); and (iv) a symptom code: IY, interveinal leaf yellowing; YM, severe yellow mosaics; NH, nettlehead; GH, green head.
AA, amino acids; D, aspartic acid; E, glutamic acid; G, glycine; K, lysine.