Table 3.
Gene responses to antioxidants by C ucumber mosaic virus (CMV) infections
| Seq_ID | Gene_ID | Description* | Fold change | ||
|---|---|---|---|---|---|
| pepo | 129A | 129Q | |||
| Catalase | |||||
| 2047518 | U07627 | gb|Nicotiana tabacum Petit Havana SR1 catalase (CAT‐1) mRNA, complete cds [U07627] | 1.715 | 1.862 | 5.573 |
| 2087798 | EF532799 | gb|Nicotiana tabacum cultivar Xanthi catalase mRNA, partial cds [EF532799] | 1.340 | 1.267 | 4.408 |
| 2069710 | EB432848 | tc|Rep: Catalase isozyme 3—Nicotiana plumbaginifolia (Leadwort‐leaved tobacco), partial (62%) [TC131485] | 1.518 | 1.554 | 2.033 |
| Superoxide dismutase | |||||
| 2045375 | DR109312 | gb|HAP4‐17 Cultured tobacco cells Nicotiana tabacum cDNA 3′ similar to putative mRNA cytostolic CuZn‐superoxide dismutase (cyt‐SOD1 gene), mRNA sequence [DR109312] | 1.333 | 1.561 | 2.396 |
| 2068264 | EB442731 | tc|Rep: Superoxide dismutase [Cu‐Zn]—Populus tremula × Populus tremuloides, partial (96%) [TC140325] | −1.174 | −1.134 | −2.220 |
| 2061599 | TA12140_4097 | tc|Rep: Superoxide dismutase [Cu‐Zn]—Nicotiana plumbaginifolia (Leadwort‐leaved tobacco), complete [TC158847] | 1.466 | 1.470 | 1.871 |
| 2055267 | DW004086 | tc|Rep: Superoxide dismutase [Fe]—Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (95%) [TC133555] | −1.393 | −1.008 | 1.762 |
| 2052338 | EB430982 | tc|Rep: Superoxide dismutase [Fe]—Solanum lycopersicum (Tomato) (Lycopersicon esculentum), complete [TC135414] | −1.367 | 1.199 | 1.510 |
| 2080462 | EB429945 | tc|Rep: Superoxide dismutase [Mn], mitochondrial precursor—Nicotiana plumbaginifolia (Leadwort‐leaved tobacco), complete [TC123616] | −1.201 | 1.014 | −1.196 |
| Ascorbate/glutathione cycle | |||||
| 2067007 | TA11931_4097 | tc|Rep: Cytosolic ascorbate peroxidase—Nicotiana tabacum (Common tobacco), complete [TC152466] | 2.698 | 3.033 | 2.744 |
| 2068600 | D85912 | gb|Nicotiana tabacum mRNA for cytosolic ascorbate peroxidase, complete cds [D85912] | 1.972 | 2.283 | 2.399 |
| 2059388 | FG148935 | tc|Rep: Stromal ascorbate peroxidase—Nicotiana tabacum (Common tobacco), partial (67%) [TC123903] | 2.220 | −1.237 | 1.255 |
| 2075790 | BP535437 | tc|Rep: Thylakoid‐bound ascorbate peroxidase—Nicotiana tabacum (Common tobacco), complete [TC125928] | −1.143 | 1.059 | −1.567 |
| 2063187 | AB022273 | gb|Nicotiana tabacum mRNA for thylakoid‐bound ascorbate peroxidase, complete cds [AB022273] | −1.057 | 1.048 | −1.386 |
| 2072727 | NP917705 | tc|Rep: Glutathione reductase, chloroplast precursor—Nicotiana tabacum (Common tobacco), complete [TC163303] | −1.291 | −1.237 | −1.392 |
| 2064573 | X76293 | gb|Nicotiana tabacum gor mRNA for glutathione reductase [X76293] | −1.528 | −1.262 | −1.410 |
| 2068132 | DV160693 | tc|Rep: Monodehydroascorbate reductase—Solanum lycopersicum (Tomato) (Lycopersicon esculentum), complete [TC141234] | 1.044 | 1.245 | 1.270 |
| 2082901 | TA12494_4097 | tc|Rep: Dehydroascorbate reductase—Nicotiana tabacum (Common tobacco), complete [TC124291] | 1.204 | 1.092 | 1.311 |
| 2084132 | TA16711_4097 | tc|Rep: Dehydroascorbate reductase—Solanum tuberosum (Potato), partial (92%) [TC149963] | −1.248 | −1.146 | −2.635 |
| 2054343 | AY074787 | gb|Nicotiana tabacum dehydroascorbate reductase (DHAR) mRNA, complete cds [AY074787] | −1.021 | −1.046 | 1.157 |
| 2068260 | TA14928_4097 | tc|Rep: Probable monodehydroascorbate reductase, cytoplasmic isoform 2—Arabidopsis thaliana (Mouse‐ear cress), partial (89%) [TC123260] | −1.132 | −1.134 | −1.392 |
*The gene descriptions are from Agilent's information for the tobacco microarray.