Table 3.
Primers used throughout this study.
| Application | Primer sequence | Amplicon size (bp) |
|---|---|---|
| Vector construction | ||
| TRI6senseF‐NcoI* | 5′‐CCTCCATGGTCGTGTTGCGTCTCCCGATCC‐3′ | 570 |
| TRI6senseR‐AscI | 5′‐GCAGGCGCGCCACCCTGCTAAAGACCCTCAG‐3′ | |
| TRI6antisenseF‐NotI | 5′‐CTTTGATGCGGCCGCGTCTCCCGATCCTG‐3′ | 570 |
| TRI6antisenseR‐BamHI | 5′‐GCATGGGATCCACCCTGCTAAAGACCCTCAG‐3′ | |
| Real‐time qRT‐PCR | ||
| TRI5forb | 5′‐ACCCTCAATTCCTTCGTCGTATG‐3′ | 141 |
| TRI5revb | 5′‐CCCAAACCATCCAGTTCTCCATC‐3′ | |
| TRI6forb | 5′‐TTATCGCCCTTCCCACCTTCAC‐3′ | 90 |
| TRI6revb | 5′‐TAAAGTCCCGTCCGCTCTCAAAG‐3′ | |
| 18Sforb | 5′‐TTGACCCGTTCGGCACCTTAC‐3′ | 75 |
| 18Srevb | 5′‐AAGTTTCAGCCTTGCGACCATAC‐3′ | |
| tubfor | 5′‐TTCCAAATCACCCACTCTC‐3′ | 104 |
| tubrev | 5′‐GAAAGTTGCCATCATACGG‐3′ | |
| Probes | ||
| TRI6probeF1 | 5′‐GACTTTGACAACTTCCCCACAT‐3′ | 478 |
| TRI6probeR2 | 5′‐AGTGATCTCGCATGTTATCCAC‐3′ | |
| 18S‐Forward | 5′‐CCTTAACGAGGAACAATTGGAG‐3′ | 514 |
| 18S‐Reverse | 5′‐CCCTAGTCGGCATAGTTTATGG‐3′ | |
| Restriction analysis of TRI4–TRI6–TRI5 cluster | ||
| H‐11 For4 | 5′‐GTGAACTTCGCGGGCGTTTACTC‐3′ | 5408 |
| H‐11 Rev13 | 5′‐TCCGGCTTGAAGGTCGTCAAAAT‐3′ |
Restriction sites are given in italic.