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. 2011 Mar 6;12(8):759–771. doi: 10.1111/j.1364-3703.2011.00709.x

Table 3.

Primers used throughout this study.

Application Primer sequence Amplicon size (bp)
Vector construction
 TRI6senseF‐NcoI* 5′‐CCTCCATGGTCGTGTTGCGTCTCCCGATCC‐3′ 570
 TRI6senseR‐AscI 5′‐GCAGGCGCGCCACCCTGCTAAAGACCCTCAG‐3′
 TRI6antisenseF‐NotI 5′‐CTTTGATGCGGCCGCGTCTCCCGATCCTG‐3′ 570
 TRI6antisenseR‐BamHI 5′‐GCATGGGATCCACCCTGCTAAAGACCCTCAG‐3′
Real‐time qRT‐PCR
 TRI5forb 5′‐ACCCTCAATTCCTTCGTCGTATG‐3′ 141
 TRI5revb 5′‐CCCAAACCATCCAGTTCTCCATC‐3′
 TRI6forb 5′‐TTATCGCCCTTCCCACCTTCAC‐3′ 90
 TRI6revb 5′‐TAAAGTCCCGTCCGCTCTCAAAG‐3′
 18Sforb 5′‐TTGACCCGTTCGGCACCTTAC‐3′ 75
 18Srevb 5′‐AAGTTTCAGCCTTGCGACCATAC‐3′
 tubfor 5′‐TTCCAAATCACCCACTCTC‐3′ 104
 tubrev 5′‐GAAAGTTGCCATCATACGG‐3′
Probes
 TRI6probeF1 5′‐GACTTTGACAACTTCCCCACAT‐3′ 478
 TRI6probeR2 5′‐AGTGATCTCGCATGTTATCCAC‐3′
 18S‐Forward 5′‐CCTTAACGAGGAACAATTGGAG‐3′ 514
 18S‐Reverse 5′‐CCCTAGTCGGCATAGTTTATGG‐3′
Restriction analysis of TRI4–TRI6–TRI5 cluster
 H‐11 For4 5′‐GTGAACTTCGCGGGCGTTTACTC‐3′ 5408
 H‐11 Rev13 5′‐TCCGGCTTGAAGGTCGTCAAAAT‐3′
*

Restriction sites are given in italic.