Table 2. Leopard sequences obtained from GenBank together with outgroups used in our study.
Accession numbers are reported with the number of sequences for each gene region per species and subspecies used in this work. Origin of the samples and original work publishing these sequences are reported.
| Accession numbers | Sequences | Gene | Species | Subspecies | Sample area | Reference |
|---|---|---|---|---|---|---|
| KY292222.1–KY292277.1 | 56 | NADH 5 | Panthera pardus | Africans | Africa | Anco et al. (2018) |
| JX559073.1–JX559076.1 | 4 | NADH 5 | P. pardus | Saxicolor | Iran | Farhadinia et al. (2012, unpublished) |
| JF720187.1–JF720319.1 | 133 | NADH 5 | P. pardus | LEO(African) | Africa | Ropiquet et al. (2015) |
| HQ185549.1–HQ185550.1 | 2 | NADH 5 | P. pardus | orientalis | Caucasus | Rozhnov, Lukarevsky & Sorokin (2011) |
| HQ185544.1–HQ185548.1 | 5 | NADH 5 | P. pardus | saxicolor | Caucasus | Rozhnov, Lukarevsky & Sorokin (2011) |
| EF551002.1 | 1 | Mitochondrion complete | P. pardus | Not specified | China | Lei et al. (2011) |
| EF056501.1 | 1 | NADH 5 | P. pardus | Not specified | India | Shouche (2016, unpublished) |
| AY035292.1 | 1 | NADH 5 | P. pardus | Melas | Java (Indonesia) | Uphyrkina et al. (2001) |
| AY035280.1–AY035291.1 | 12 | NADH 5 | P. pardus | Shortridgei | Central Africa (Namibia, Botswana, Kruger & Zimbabwe) | Uphyrkina et al. (2001) |
| AY035279.1 | 1 | NADH 5 | P. pardus | Nimr | South Arabia (wild animal, exact location not specified) | Uphyrkina et al. (2001) |
| AY035277.1–AY035278.1 | 2 | NADH 5 | P. pardus | Saxicolor | Central Asia (Captive) | Uphyrkina et al. (2001) |
| AY035276.1 | 1 | NADH 5 | P. pardus | Sindica | Central Asia (Baluchistan) | Uphyrkina et al. (2001) |
| AY035270.1–AY035275.1 | 6 | NADH 5 | P. pardus | Fusca | India | Uphyrkina et al. (2001) |
| AY035267.1–AY035269.1 | 3 | NADH 5 | P. pardus | Kotiya | Srilanka | Uphyrkina et al. (2001) |
| AY035264.1– AY035266.1 | 3 | NADH 5 | P. pardus | Delacouri | East Asia (South China) | Uphyrkina et al. (2001) |
| AY035262.1–AY035263.1 | 2 | NADH 5 | P. pardus | Japonensis | East Asia (North China) | Uphyrkina et al. (2001) |
| AY035260.1–AY035261.1 | 2 | NADH 5 | P. pardus | Orientalis | Russia | Uphyrkina et al. (2001) |
| KF768352–KF768354 | 3 | NADH 5 | P. pardus | Saxicolor | Iran | Farhadinia et al. (2015) |
| EF551004.1 | 1 | Mitochondrion complete | Uncia uncia | Out Group | China | Wei, Wu & Jiang (2008) |
| EF551003.1 | 1 | Mitochondrion complete | Panthera tigris | Out Group | China | Lei et al. (2011) |
| AF385614.1 | 1 | Mitochondrion complete | P. tigris | Out Group | Africa | Dubach et al. (2005) |
| HM589215.1 | 1 | Mitochondrion complete | P. tigris | Out Group | China | Zhang et al. (2011) |
| AF385613.1 | 1 | Mitochondrion complete | P. leo | Out Group | Brookfield zoo (Exact location unknown) | Dubach et al. (2005) |