Figure 6.

Correlation between the experimental binding affinities and the calculated binding affinities using our scoring function for both class A and class B ligands. The abscissa and ordinate indicate the experimental and calculated binding affinities, respectively. The calculated binding affinities with the weighting factor α = 1 (left-hand figure) and those with the weighting factor α = 0 (right-hand figure) are shown. The filled and open circles indicate class A ligands and class B ligands, respectively.