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. Author manuscript; available in PMC: 2020 Jul 18.
Published in final edited form as: Cell Chem Biol. 2019 May 16;26(7):913–925.e4. doi: 10.1016/j.chembiol.2019.04.001

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
KDEL (mouse monoclonal 10C3) Enzo Life Sciences Cat#ADI-SPA-827-D
M2 anti-FLAG (mouse monoclonal) Sigma Aldrich Cat#F3165
Anti-α-Tubulin (mouse monoclonal B-5-1-2) Sigma Aldrich Cat#T5168
BiP/GRP-78 (mouse monoclonal E-4) Santa Cruz Biotechnology Cat#sc-166490
β-actin (mouse monoclonal AC-15) Sigma Aldrich Cat#A1978
GRP94 (rabbit polyclonal N1N3) GenTex Cat#GTX103203
HYOU1 (ORP150) (rabbit polyclonal C2C3) GenTex Cat#GTX102255
ERdj3 (DNAJB11) (rabbit polyclonal) ProteinTech Cat#15484-1-AP
PDIA4 (ERp72) (rabbit polyclonal) ProteinTech Cat#14712-1-AP
PDIA6 (rabbit polyclonal N1N3) GenTex Cat#GTX121275
PDIA3 (ERp57) (rabbit polyclonal G117) CellSignaling Cat#2881S
free λ LC antibody (sheep polyclonal) Bethyl Laboratories Cat#P80-127
HRP-conjugated goat anti-human λ light chain antibody Bethyl Laboratories Cat#A80-116P
Bacterial and Virus Strains
Biological Samples
Chemicals, Peptides, and Recombinant Proteins
13C6,15N4-L-Arginine Cambridge Isotopes Laboratories Cat#CNLM-539-H
Anti-FLAG M1 agarose affinity gel Sigma Aldrich Cat#A4596-5ML
Tris(2-carboxyethyl)phosphine hydrochloride (TCEP-HCl) ThermoFisher Cat#20490
Trypsin (Sequencing grade modified) Promega Cat#5111
Iodoacetamide Sigma Aldrich Cat#I6125
RapiGest SF Surfactant Waters Cat#186001861
purified human Bence Jones λ light chain Bethyl Laboratories Cat#P80-127
EasyTag EXPRESS [35S] Protein Labeling Mix PerkinElmer Cat#NEG772002MC
Critical Commercial Assays
SILAC Protein Quantification kit – DMEM ThermoFisher Cat#A33969
TMTsixplex Isobaric Label Reagent Set ThermoFisher Cat#90066
Deposited Data
Experimental Models: Cell Lines
HEK293DAX cells this group, Shoulders et al., 2013) HEK293DAX
Experimental Models: Organisms/Strains
Oligonucleotides
Recombinant DNA
Mammalian expression plasmid (pCMVI) for FTALLC this group, Cooley et al., 2014 ss.FT.ALLC-pCMV1
Mammalian expression plasmid (pCMVI) for FTJTO this group, Cooley et al., 2014 ss.FT.JTO-pCMV1
Mammalian expression plasmid (pDEST40) for untagged ALLC this group, Cooley et al., 2014 ss.ALLC-pDEST40
Entry plasmid (gateway cloning) for GRP94, GRP94.pDONR223 Addgene Cat #82130
Mammalian expression plasmid (pDEST40) for GRP94 this paper, Genereux et al., 2015 GRP94.pDEST40
Mammalian expression plasmid for FTBiP this group, Genereux et al., 2015 pFLAG.BiP.WT
Mammalian expression plasmid (pDEST40) for ERdj3 this group, Genereux et al., 2015 ss.ERdj3.pDEST40
Software and Algorithms
Integrated Proteomics Pipeline Suite (IP2) Integrated Proteomics Applications, Inc. N/A
RawConverter He et al., 2015 N/A
ProLuCID (IP2 Suite) Xu et al., 2015 N/A
DTASelect (IP2 Suite) Tabb et al., 2002 N/A
Census (IP2 Suite) Park et al., 2014 N/A
Other