Table 3.
Categorization of DEGs on the basis of KEGG analysis
| Light condition (75 μmol m − 2 s − 1) | Total no. of genes | No. of genes identified by KEGG | Major pathways involved | No. of genes in each pathway |
|---|---|---|---|---|
| 150 vs 112 | 1014 | 184 | Metabolic pathway | 71 |
| Secondary metabolite biosynthesis | 40 | |||
| Plant hormone signal transduction | 19 | |||
| Protein processing in ER | 15 | |||
| MAPK signaling | 11 | |||
| Carbon metabolism | 11 | |||
| 150 vs 75 | 1424 | 290 | Metabolic pathway | 143 |
| Secondary metabolite synthesis | 82 | |||
| Carbon metabolism | 24 | |||
| Amino acid biosynthesis | 19 | |||
| Glycolysis | 15 | |||
| Plant-pathogen interaction | 13 | |||
| Glutathione metabolism | 13 | |||
| RNA transport | 13 | |||
| Starch and sucrose metabolism | 13 | |||
| Oxidative phosphorylation | 12 | |||
| Purine metabolism | 12 | |||
| Amino sugar and nucleotide sugar metabolism | 10 | |||
| Plant hormone signal transduction | 10 | |||
| 150 vs 38 | 1789 | 420 | Metabolic pathway | 79 |
| Secondary metabolite biosynthesis | 114 | |||
| Ribosome | 51 | |||
| Carbon metabolism | 27 | |||
| Amino acid biosynthesis | 25 | |||
| Oxidative phosphorylation | 21 | |||
| Phenylpropanoid biosynthesis pathway | 20 | |||
| RNA transport | 17 | |||
| Starch and sucrose metabolism | 17 | |||
| Spliceosome | 17 | |||
| Plant-pathogen interaction | 17 | |||
| Glutathione metabolism | 16 | |||
| Plant hormone signal transduction | 15 | |||
| Endocytosis | 13 | |||
| Glycine, serine and threonine metabolism | 13 | |||
| Glycolysis | 13 | |||
| Purine metabolism | 12 | |||
| Amino sugar and nucleotide sugar metabolism | 12 | |||
| Cysteine and methionine metabolism | 11 | |||
| 2-oxocarboxylic acid metabolism | 10 | |||
| Protein processing in ER | 10 | |||
| Ubiquitin mediated proteolysis | 10 | |||
| Photosynthesis | 10 | |||
| 112 vs 75 | 1163 | 249 | Metabolic pathway | 122 |
| Biosynthesis of secondary metabolites | 63 | |||
| Carbon metabolism | 18 | |||
| Starch and sucrose metabolism | 15 | |||
| Plant hormone signal transduction | 14 | |||
| Amino acid biosynthesis | 12 | |||
| Protein processing in the ER | 11 | |||
| Phenylpropanoid biosynthesis pathway | 10 | |||
| 112 vs 38 | 1518 | 314 | Metabolic pathway | 131 |
| Secondary metabolite biosynthesis | 59 | |||
| Ribosome | 30 | |||
| Plant hormone signal transduction | 27 | |||
| Carbon metabolism | 22 | |||
| Oxidative phosphorylation | 18 | |||
| Protein processing in ER | 13 | |||
| MAPK signaling | 13 | |||
| Spliceosome | 12 | |||
| Purine metabolism | 12 | |||
| Glyoxylate and dicarboxylate metabolism | 11 | |||
| Amino acid biosynthesis pathway | 10 | |||
| 75 vs 38 | 1047 | 172 | Metabolic pathway | 64 |
| Biosynthesis of secondary metabolite | 37 | |||
| Plant hormone signaling | 10 | |||
| Plant-pathogen interaction | 10 |