Table 1. Results for CDK Dataset (Model Dataset 1) with Best Weighting (0.5–0–0.5) Combination as Obtained from the Retrospective Study.
model | division method | R2 | Q2 | MAE95%Train | QExt-F12 | MAE95%Test | correct prediction in % | training set range | number of compounds outside ADa |
---|---|---|---|---|---|---|---|---|---|
1 | sorted responseb | 0.74 | 0.71 | 0.15 | 0.73 | 0.14 | 87.84 | 2.396 | 0 |
2 | 0.71 | 0.69 | 0.14 | 0.69 | 0.13 | 86.49 | 0 | ||
3 | 0.68 | 0.66 | 0.14 | 0.68 | 0.13 | 85.14 | 1 (122) | ||
4 | 0.70 | 0.67 | 0.14 | 0.67 | 0.13 | 85.14 | 4 (118, 119, 122, 123) | ||
5 | 0.63 | 0.61 | 0.17 | 0.65 | 0.17 | 77.02 | 0 | ||
6 | Kennard–Stonec | 0.78 | 0.75 | 0.14 | 0.63 | 0.13 | 85.29 | 2.342 | 0 |
7 | 0.77 | 0.75 | 0.14 | 0.59 | 0.14 | 79.41 | 1 (195) | ||
8 | 0.74 | 0.71 | 0.14 | 0.54 | 0.13 | 89.71 | 0 | ||
9 | 0.72 | 0.70 | 0.14 | 0.56 | 0.12 | 83.82 | 0 | ||
10 | 0.71 | 0.68 | 0.14 | 0.54 | 0.13 | 86.76 | 0 | ||
11 | modified-k-medoidsd | 0.74 | 0.71 | 0.13 | 0.70 | 0.17 | 86.67 | 2.397 | 0 |
12 | 0.69 | 0.66 | 0.13 | 0.65 | 0.14 | 89.33 | 3 (30, 38, 39) | ||
13 | 0.69 | 0.66 | 0.13 | 0.65 | 0.14 | 88 | 0 | ||
14 | 0.70 | 0.68 | 0.14 | 0.68 | 0.13 | 92 | 0 | ||
15 | 0.64 | 0.61 | 0.16 | 0.65 | 0.14 | 88 | 0 |
AD using standardization technique is used and compound ID mentioned under parenthesis.
NTraining = 154, NTest = 74.
NTraining = 156, NTest = 68.
NTraining = 149, NTest = 75.