Table 2.
Family |
Population |
Mutation |
Zygosity |
GnomAD* |
Czech Alleles |
Pathogenicity Evidence |
References |
|
DNA |
Protein |
|||||||
C2 | European Czech | c.1216+1G>A | “p.?” | HET | 0 | 0 | Predicted pathogenic | Novel |
c.2411G>A | p.(Arg804His) | HET | 3/245,612 | 0 | Decreased level of matured mutant protein compared with wild type | 24, 25 | ||
C3 | European Czech | c.2263C>T | p.(Arg755Trp) | HOM† | 2/244,792 | 0 | Endoplasmic reticulum retained, misfolded protein | 24, 26–28 |
C4 | European Czech | c.2527_2529del | p.(Leu843del) | HET | 0 | 0 | Predicted pathogenic | 29 |
c.1237G>A | p.(Gly413Arg) | HET | 0 | 1/4,528 | Predicted pathogenic | Novel | ||
C5 | European Czech | c.625C>T | p.(Arg209Trp) | HET | 3/246,062 | 0 | Endoplasmic reticulum retained, misfolded protein | 24, 28 |
c.2240+5G>A | p.Thr747* | HET | 0 | 0 | Splicing defect verified by cDNA analysis (current study) | Novel | ||
B1 | European British | c.2240+1G>A | “p.?” | HET | 6/276,692 | 0 | Predicted pathogenic | 27, 29 |
c.427G>A | p.(Glu143Lys) | HET | 1/246,144 | 0 | Endoplasmic reticulum retained, misfolded protein | 24, 27, 30 | ||
B2 | European British | c.2003T>C | p.(Leu668Pro) | HET† | 4/244,724 | 0 | Predicted pathogenic | Novel |
c.2528T>C | p.(Leu843Pro) | HET† | 6/276,968 | 0 | Endoplasmic reticulum retained, misfolded protein | 1, 24 |
p.? refers to unknown effect on protein structure. HET, heterozygous; HOM, homozygous.
Heterozygous allele count/total number of alleles.
Segregation analysis not performed, hence possibility of a deletion or existence of a possibly pathogenic intronic variant in a trans configuration exists.