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. 2019 Jul 22;10:3255. doi: 10.1038/s41467-019-11216-7

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 1 — Maximum likelihood phylogeny of 122 high-quality T. pallidum subspecies pallidum genomes, showing lineage and country of origin. Tree includes sequences from recently clinically derived samples and those with more extensive laboratory passage. Ultra-Fast bootstrap values > = 95% are labelled with black nodes points. Branches are scaled by mean nucleotide substitutions/site