TABLE 3.
Sequences characteristics.
Locus | Sequence length (bp) exon (intron) | Alignment length (bp) exon (intron) | Number of parsimony-informative sites |
AT1G09680 | 786–1505 (0) | 15081 (0) | 734 |
AT2G37230 | 391–1380 (0) | 13592 (0) | 533 |
AT1G14610 | 250–362 (55–150) | 365 (1053) | 197 |
AT1G04780 | 435–808 (0) | 811 (0) | 259 |
Agt1 | 206–289 (220–818) | 289 (04) | 93 |
1A sample-specific insertion of 14 bps in Orobanche flava has been removed. 2An invariant motif of 21 bp at the 3′ terminus sequenced only for three Pedicularis species (P. aspleniifolia, P. rostratospicata, and P. verticillata) has been removed. 3Sample-specific insertions removed: motifs of 18 and 5 bps, respectively, in Melampyrum sylvaticum, a motif of 52 bps in Striga gesnerioides. 4Intron not universally alignable across all taxa and, therefore, removed.