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. 2019 Mar 22;5(1):102–116. doi: 10.3934/microbiol.2019.1.102

Table 2. Genera showing statistical differences in relative abundance (% sequences) when comparing DNA extracted directly from faeces or after exposure to ethidium monoazide (EMA).

Genera Sample/treatment
Basal Basal/EMA T1 T1/EMA T3 T3/EMA T6 T6/EMA
Faecalibacterium 6.16 0.06*** 21.74 1.35*** 27.46 0.45*** 29.91 0.80***
Lachnospiraceae inc. sed. 5.33 0.05*** 17.23 0.35*** 7.60 0.52*** 10.67 0.93***
Streptococcus 2.37 0.00*** 0.15 0.01** 1.56 0.02*** 0.53 0.04***
Blautia 2.26 0.01*** 7.06 0.29*** 5.24 0.20*** 5.50 0.89***
Oscillibacter 1.81 0.00*** 0.76 0.10*** 0.82 0.02*** 0.14 0.15
Roseburia 1.37 0.04*** 1.26 0.17*** 0.65 0.34* 3.71 0.36***
Clostridium cluster XVIII 1.14 0.22*** 0.38 0.00*** 0.08 0.00 0.07 0.00*
Doreaa 1.09 0.00*** 0.32 0.00*** 0.23 0.00** 0.35 0.00***
Clostridium cluster XIVaa 0.33 0.00*** 0.09 0.00** 0.11 0.00* 0.16 0.00***
Coprococcus 0.11 0.01* 0.61 0.09*** 1.79 0.04*** 1.30 0.16***
Collinsella 0.00 0.00 3.16 0.13*** 2.93 0.13*** 7.22 0.30***
Sutterellaa 0.00 0.00 0.09 0.00** 1.45 0.00*** 0.14 0.00**
Coriobacteriuma 0.00 0.00 0.12 0.00** 0.03 0.00 0.05 0.00

*p value <0.05; ** p value <0.01; *** p value <0.001.

aGenera not detected by treating feacal samples with EMA before DNA extraction.

In bold, genera enriched after isoflavone ingestion, as compared to the basal sample. T1, T3 and T6 represent one, three and sixth months respectively of isoflavone supplementation.