Table 2.
trans-NATs correlated with target mRNA steady-state level. For each trans-NAT / target pair, the fold change in RNA steady-state level and associated adjusted p value are indicated in columns tNAT_FC and tNAT_pval for transNAT, trgt_FC and trgt_pval for target gene. The experimental conditions compared are indicated in the column “Comparison” where “ctrl” refers to untreated control
| trans-NAT | Target | tNAT_FC | tNAT_pval | trgt_FC | trgt_pval | Comparison | Correlation |
|---|---|---|---|---|---|---|---|
| XLOC_003697 | AT4G28790 | 2.8 | 3.6E-9 | 2.43 | 2.9E-8 | Root ctrl_Shoot ctrl | Positive |
| XLOC_000486 | AT1G66320 | 2.27 | 0.017 | 3.88 | 2.2E-4 | Root ctrl_Shoot ctrl | Positive |
| XLOC_002538 | AT3G48640 | 0.06 | 6.5E-6 | 0.21 | 1.3E-6 | Root ctrl_Shoot ctrl | Positive |
| XLOC_001309 | AT3G22370 | 0.33 | 0.0013 | 0.28 | 5.3E-12 | Root ctrl_Shoot ctrl | Positive |
| XLOC_003241 | AT4G01770 | 2.79 | 0.0025 | 4.57 | 1.2E-12 | Root ctrl_Shoot ctrl | Positive |
| XLOC_003681 | AT5G41380 | 0.06 | 8.6E-17 | 4.73 | 3.7E-8 | Root ctrl_Shoot ctrl | Negative |
| XLOC_002538 | AT5G66670 | 0.06 | 6.5E-6 | 3.7 | 3.8E-10 | Root ctrl_Shoot ctrl | Negative |
| XLOC_001125 | AT1G63350 | 5.12 | 1.8E-7 | 0.44 | 1.2E-5 | Root ABA_Root ctrl | Negative |