Table 4.
lincRNA-DH correlated with target loci steady-state mRNA level. Number of pairs with either a positive or negative correlation between putative lincRNA-DH and predicted target mRNA expression. The experimental conditions compared are indicated in the first column where “ctrl” indicates untreated control. The figures in brackets show the number of those pairs with a Pearson correlation coefficient > 0.6 or < -0.6 across the 12 experimental correlations
| Treatment | Positive correlation | Negative correlation |
|---|---|---|
| Low Pi vs High Pi | 29 (22) | 24 (4) |
| Root ABA vs Root ctrl | 13 (5) | 5 (1) |
| Root MeJA vs Root ctrl | 5 (2) | 1 (0) |
| Shoot ABA vs Shoot ctrl | 8 (1) | 6 (0) |
| Shoot IAA vs Shoot ctrl | 1 (1) | 0 (0) |
| Root ctrl vs Shoot ctrl | 67 (43) | 54 (33) |
| Total (unique) | 100 (64) | 81 (37) |