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. 2019 Jun 4;4(6):9710–9719. doi: 10.1021/acsomega.9b00020

Figure 4.

Figure 4

Reverse docking pipeline proposed in this study. The computational pipeline consists of three major stages. In the first stage, the PharmMapper sever is used to narrow down the protein pool by the pharmacophore matching. In the second stage, reverse docking by Autodock Vina is used for selecting target candidates by structure-based virtual screening simulation. Finally, MD simulation is used to refine and validate the candidate targets.