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. 2019 Jun 5;47(13):6885–6899. doi: 10.1093/nar/gkz494

Figure 5.

Figure 5.

Global structure analysis of the mgtA RNA aptamer with divalent metal ions. (A) Scattering profiles collected at separate RNA concentrations 0.8, 1.6 and 3.2 mg/ml with indicated metal, then merged. (B) Dimensionless Kratky plots. (C) Pair-wise distance distribution plots for all RNAs. (D) Simulated 3D structure of the RNA aptamer by SimRNA embedded in the envelope obtained from SAXS in the presence of Mn2+. SAXS simulated envelope models for WT RNA with Ca2+ (E), Mg2+ (F) and the G16A/G17A mutant RNA that is unable to bind metal (G).