Table 6. Putative QTLs (≤1 Mb interval regions) at DGI stages for favorable agronomic traits.
| Cross combination | Fertilizer dose (% NPK) |
QTL designation | Chromosome | Left marker | Right marker | Size of the QTL (kb) | LOD score | Additive effect | R2 (%) | No. of candidate genes detected within the locus |
|---|---|---|---|---|---|---|---|---|---|---|
| HAN × WTR-1 | 80% | qPH-III_2 | 2 | S2_29072519 | S2_28879120 | 193.40 | 3.65 | 2.86 | 18.12 | 15 |
| HAN × WTR-1 | 0% | qLC-I_2 | 2 | S2_30451119 | S2_30564762 | 113.60 | 3.04 | 0.64 | 10.79 | 12 |
| HAN × WTR-1 | 80% | qPH-I_5 | 5 | S5_17801786 | S5_17996757 | 195.10 | 3.59 | 1.21 | 15.61 | 16 |
| HAN × WTR-1 | 80% | qTN-III_5 | 5 | S5_17859957 | S5_17801758 | 58.20 | 26.77 | 3.62 | 28.98 | 3 |
| HAN × WTR-1 | 0% | qTN-IV_5 | 5 | S5_17465069 | S5_17801758 | 336.70 | 25.70 | 4.72 | 5.85 | 25 |
| CH448 × WTR-1 | 0% | qLC-II_8 | 8 | S8_8206216 | S8_8918154 | 711.90 | 5.26 | 1.37 | 22.85 | 30 |
| HAN × WTR-1 | 100% | qTN-I_9 | 9 | S9_20844013 | S9_20779092 | 64.92 | 3.11 | -0.65 | 13.00 | 10 |
| HAN × WTR-1 | 80% | qTN-III_12 | 12 | S12_6585982 | S12_5905028 | 681.11 | 3.10 | -1.00 | 1.89 | 9 |