Table 2.
Differential expression of manually selected genes functionally associated with the generation and detoxification of ROS in TMEV-DL.
| Function | Genes (N) | Differentially Expressed Genes | ||||
|---|---|---|---|---|---|---|
| Direction of change | 14dpi | 42dpi | 98dpi | 196dpi | ||
| Mitochondrial respiratory chain | 55 | Up | 0 | 0 | 0 | 0 |
| Down | 7(12.7%) | 31(56.36%) | 30(54.55%) | 36 (65.45%) | ||
| NADPH oxidase enzyme system | 9 | Up | 5 (55.5%) | 6 (66.7%) | 6 (66.7%) | 6 (66.7%) |
| Down | 0 | 0 | 0 | 0 | ||
| ROS detoxification system | 17 | Up | 0 | 2 (11.76%) | 1 (5.88%) | 4 (23.53%) |
| Down | 1 (5.88%) | 2 (11.76%) | 3 (17.65%) | 3 (17.65%) | ||
| Catabolic enzymes with oxidase activity | 3 | Up | 1 (33.3%) | 2 (66.7%) | 2 (66.7%) | 1 (33.3%) |
| Down | 0 | 1 (33.3%) | 0 | 0 | ||
| Pyruvate dehydrogenase complex) | 5 | Up | 0 | 0 | 0 | 0 |
| Down | 0 | 3 (60%) | 2 (40%) | 0 | ||
| ROS toxification system | 4 | Up | 0 | 0 | 0 | 0 |
| Down | 0 | 0 | 1 (25.0%) | 1 (25.0%) |