Table 3.
No. | Model | Descriptors | 5-fold cross-validation result | Validation result using external test set | ||||||
---|---|---|---|---|---|---|---|---|---|---|
SE | SP | PPV | MCC | SE | SP | PPV | MCC | |||
1 | RF-a1 | 32 | 0.682 | 0.970 | 0.912 | 0.750 | 0.675 | 0.975 | 0.915 | 0.718 |
2 | RF-b1 | 53 | 0.621 | 0.973 | 0.903 | 0.750 | 0.650 | 0.981 | 0.915 | 0.716 |
3 | RF-c1 | 79 | 0.667 | 0.992 | 0.927 | 0.823 | 0.690 | 0.980 | 0.922 | 0.742 |
4 | K-NN-a1 | 32 | 0.682 | 0.905 | 0.861 | 0.710 | 0.695 | 0.926 | 0.880 | 0.622 |
5 | K-NN-b1 | 53 | 0.621 | 0.936 | 0.873 | 0.710 | 0.599 | 0.931 | 0.865 | 0.557 |
6 | K-NN-c1 | 79 | 0.636 | 0.936 | 0.876 | 0.760 | 0.609 | 0.931 | 0.867 | 0.565 |
7 | Tree-a1 | 32 | 0.621 | 0.943 | 0.879 | 0.680 | 0.635 | 0.942 | 0.881 | 0.609 |
8 | Tree-b1 | 53 | 0.667 | 0.939 | 0.885 | 0.566 | 0.624 | 0.914 | 0.856 | 0.545 |
9 | Tree-c1 | 79 | 0.682 | 0.947 | 0.894 | 0.780 | 0.711 | 0.943 | 0.897 | 0.670 |
10 | AB-a1 | 32 | 0.682 | 0.920 | 0.873 | 0.659 | 0.731 | 0.900 | 0.867 | 0.603 |
11 | AB-b1 | 53 | 0.667 | 0.936 | 0.882 | 0.741 | 0.695 | 0.902 | 0.860 | 0.578 |
12 | AB-c1 | 79 | 0.621 | 0.928 | 0.867 | 0.824 | 0.741 | 0.941 | 0.901 | 0.687 |
13 | NB-a1 | 32 | 0.766 | 0.795 | 0.790 | 0.483 | 0.758 | 0.746 | 0.748 | 0.421 |
14 | NB-b1 | 53 | 0.777 | 0.904 | 0.879 | 0.644 | 0.682 | 0.894 | 0.852 | 0.555 |
15 | NB-c1 | 79 | 0.761 | 0.908 | 0.879 | 0.640 | 0.712 | 0.905 | 0.867 | 0.598 |
16 | RF-a2 | 26 | 0.805 | 0.994 | 0.956 | 0.860 | 0.655 | 0.991 | 0.924 | 0.710 |
17 | RF-b2 | 50 | 0.839 | 0.994 | 0.963 | 0.882 | 0.690 | 0.983 | 0.924 | 0.675 |
18 | RF-c2 | 65 | 0.747 | 0.997 | 0.947 | 0.830 | 0.724 | 1.000 | 0.945 | 0.761 |
19 | K-NN-a2 | 26 | 0.793 | 0.960 | 0.926 | 0.766 | 0.724 | 0.957 | 0.910 | 0.574 |
20 | K-NN-b2 | 50 | 0.747 | 0.945 | 0.906 | 0.702 | 0.724 | 0.957 | 0.910 | 0.585 |
21 | K-NN-c2 | 65 | 0.782 | 0.951 | 0.917 | 0.739 | 0.793 | 0.957 | 0.924 | 0.597 |
22 | Tree-a2 | 26 | 0.759 | 0.971 | 0.929 | 0.769 | 0.655 | 0.966 | 0.903 | 0.601 |
23 | Tree-b2 | 50 | 0.805 | 0.937 | 0.910 | 0.726 | 0.448 | 0.983 | 0.876 | 0.629 |
24 | Tree-c2 | 65 | 0.782 | 0.963 | 0.926 | 0.765 | 0.793 | 0.966 | 0.931 | 0.656 |
25 | AB-a2 | 26 | 0.805 | 0.937 | 0.910 | 0.726 | 0.655 | 0.957 | 0.897 | 0.602 |
26 | AB-b2 | 50 | 0.828 | 0.931 | 0.910 | 0.732 | 0.793 | 0.948 | 0.917 | 0.621 |
27 | AB-c2 | 65 | 0.851 | 0.951 | 0.931 | 0.788 | 0.828 | 0.974 | 0.945 | 0.570 |
28 | NB-a2 | 26 | 0.839 | 0.951 | 0.929 | 0.780 | 0.724 | 0.871 | 0.841 | 0.551 |
29 | NB-b2 | 50 | 0.816 | 0.966 | 0.936 | 0.796 | 0.621 | 0.914 | 0.855 | 0.542 |
30 | NB-c2 | 65 | 0.885 | 0.943 | 0.931 | 0.795 | 0.712 | 0.905 | 0.867 | 0.598 |
1-15: neuroprotective models against hypoxia-induced neurotoxicity (NIN models).
16-30: neuroprotective models against H2O2-induced neurotoxicity (NHN models).
a: models built by DS_2D descriptors.
b: models built by MOE_2D descriptors.
c: models built by DS_MOE 2D descriptors.