Table 1.
Primers used in qPCR and TAF-ChIP library preparation.
| Mapk distal Fwd | ATCGGGACCTTAAGCCAAGT |
| Mapk distal Rev | AAACGCTTTTACTGCTGATGG |
| Dock Fwd | GCTCCGGCAAAATCATTAAA |
| Dock Rev | CGCGATTGAAAAACACACAA |
| Dab Fwd | CCCCACAACGCCTTAAAGTA |
| Dab Rev | TTTGCGTCTTCCGTCTCTTT |
| Rca1 Fwd | GGTCACACTGATCCGTACCC |
| Rca1 Rev | CTCCAACTCGAAGGATGACC |
| Primer-Neg Fwd | CCATTAATCGAGGGCTGAAA |
| Primer-Neg Rev | TTGGGGCATAAACAGAGGAC |
| fw ATAC-seq primer, general, no index | AATGATACGGCGACCACCGAGATCTACACTCGTCGGCAGCGTCAGATGT*G |
| rev ATAC-seq primer, Truseq, index 34 CATGGC | CAAGCAGAAGACGGCATACGAGATGCCATGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 48 TCGGCA | CAAGCAGAAGACGGCATACGAGATTGCCGAGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 22 CGTACG | CAAGCAGAAGACGGCATACGAGATCGTACGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 15 ATGTCA | CAAGCAGAAGACGGCATACGAGATTGACATGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 46 TCCCGA | CAAGCAGAAGACGGCATACGAGATTCGGGAGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 45 TCATTC | CAAGCAGAAGACGGCATACGAGATGAATGAGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 40 CTCAGA | CAAGCAGAAGACGGCATACGAGATTCTGAGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 39 CTATAC | CAAGCAGAAGACGGCATACGAGATGTATAGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 38 CTAGCT | CAAGCAGAAGACGGCATACGAGATAGCTAGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 37 CGGAAT | CAAGCAGAAGACGGCATACGAGATATTCCGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 36 CCAACA | CAAGCAGAAGACGGCATACGAGATTGTTGGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 35 CATTTT | CAAGCAGAAGACGGCATACGAGATAAAATGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 25 ACTGAT | CAAGCAGAAGACGGCATACGAGATATCAGTGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 26 ATGAGC | CAAGCAGAAGACGGCATACGAGATGCTCATGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 27 ATTCCT | CAAGCAGAAGACGGCATACGAGATAGGAATGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 28 CAAAAG | CAAGCAGAAGACGGCATACGAGATCTTTTGGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 23 GAGTGG | CAAGCAGAAGACGGCATACGAGATCCACTCGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 24 GGTAGC | CAAGCAGAAGACGGCATACGAGATGCTACCGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 42 TAATCG | CAAGCAGAAGACGGCATACGAGATCGATTAGTCTCGTGGGCTCGGAGATG*T |
| rev ATAC-seq primer, Truseq index, 41 GACGAC | CAAGCAGAAGACGGCATACGAGATGTCGTCGTCTCGTGGGCTCGGAGATG*T |