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. 2019 Jul 9;16(7):441–450. doi: 10.1089/fpd.2019.2662

Table 1.

Number of Uploads1 of Raw Sequences of Salmonella, E. coli2, Campylobacter, Listeria, and Other Foodborne Bacterial Pathogens by Network or Agency to the GenomeTrakr Databases at NCBI.

  PulseNet/CDC GenomeTrakr/FDA FSIS Total
Salmonella 78,411 41,503 17,219 137,133
E. coli 25,304 3,637 2,466 31,407
Campylobacter 9,497 2,666 11,804 23,967
Listeria 5,047 12,365 702 18,114
Other3 608 825 978 2,411
Total 118,867 60,996 33,169 213,032
1

: the number includes all sequences uploaded until May1, 2019

2

: E. coli includes STEC, other pathotypes, Shigella and commensal E.coli

3

: other foodborne pathogens include Yersinia, Cronobacter, Clostridium and Vibrio spp.

CDC, Centers for Disease Control &Prevention; FDA, Food and Drug Administration; FSIS, Food Safety and Inspection Service; NCBI, National Center for Biotechnology Information.