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. 2017 Sep 19;5(2):122–128. doi: 10.1093/nop/npx020

Table 3.

Univariate Analyses Results Among SNPs

Pathway Gene SNP ID Location Chr: Position MAF MA Sig. OR
Clock ARNTL2 rs922270 Intron 12: 27396218 0.155 C .033 1.869
Clock CLOCK rs3792603 Intron 4: 55996815 0.215 G .059 1.599
Clock PER1 rs2253820 Coding 17: 7988894 0.152 A .089 .604
Clock PER2 rs934945 Coding 2: 238819792 0.187 A .100 .614
Clock FBXL3 rs700361 Intron 13: 76497955 0.101 C .128 .549
Clock CLOCK rs11932595 Intron 4: 56018354 0.411 G .149 1.363
Clock CLOCK rs11931061 Intron 4: 56033550 0.327 G .149 .703
Clock ARNTL2 rs17497606 Intron 12: 27385716 0.186 T .175 1.471
Clock PER3 rs707467 Intron 1: 7784271 0.179 G .190 .690
Clock FBXL3 rs9573983 Intron 13: 76492516 0.066 G .191 .561
Clock PER3 rs10462020 Coding 1: 7803270 0.195 G .215 1.409
Clock ARNTL2 rs7300833 Intron 12: 27441977 0.098 G .229 .630
Clock PER2 rs10462023 Intron 2: 238849320 0.407 A .300 1.259
Clock PER3 rs228642 Intron 1: 7803233 0.412 C .353 .806
Clock ARNTL2 rs11048980 Intron 12: 27394814 0.091 C .370 .721
Clock PER1 rs2585408 3’ Flanking 17: 7984478 0.423 T .439 1.186
Clock ARNTL2 rs2306073 Intron 12: 27447104 0.322 A .441 1.196
Clock ARNTL2 rs2289709 3’ Flanking 12: 27464900 0.134 A .451 1.283
Clock ARNTL2 rs1471327 Intron 12: 27420353 0.125 T .454 .786
Clock ARNTL2 rs1443857 Intron 12: 27436627 0.148 A .459 1.242
Inflammation IL4 rs2243300 5’ Flanking 5: 132031985 0.076 T .503 .757
Clock ARNTL2 rs10842913 Intron 12: 27460330 0.094 A .520 1.291
Clock ARNTL2 rs7306410 Intron 12: 27416863 0.182 C .522 1.191
Clock ARNTL2 rs2587052 Intron 12: 27460479 0.229 T .530 1.178
Clock ARNTL2 rs10506018 Intron 12: 27387124 0.17 G .551 .841
Clock ARNTL2 rs11048994 Intron 12: 27422045 0.191 A .588 .868
Clock PER3 rs697686 Intron 1: 7790158 0.344 A .592 .880
Clock ARNTL2 rs1037921 Coding 12: 27444833 0.054 C .592 1.348
Clock ARNTL2 rs3751221 Intron 12: 27429922 0.17 C .613 1.166
Clock PER3 rs10127838 Intron 1: 7804367 0.224 T .614 1.135
Clock CLOCK rs1522113 Intron 4: 56026528 0.053 A .617 .787
Clock ARNTL2 rs1256955 Intron 12: 27460292 0.192 C .629 1.143
Clock ARNTL2 rs11048977 Intron 12: 27388716 0.198 A .656 .886
Clock CLOCK rs9312661 Intron 4: 56037083 0.378 A .716 .920
Clock PER3 rs228682 Intron 1: 7796286 0.411 C .785 1.063
Clock ARNTL2 rs4964058 Intron 12: 27414033 0.469 G .817 1.052
Clock PER3 rs228729 5’ near gene 1: 7785635 0.332 A .823 .951
Clock PER2 rs6431590 Intron 2: 238829867 0.308 G .828 .951
Clock PER1 rs2518023 5’ Flanking 17: 7997331 0.088 A .842 .930
Clock PER2 rs4663868 Intron 2: 238825830 0.08 T .856 1.071
Inflammation IL4 rs2243288 Intron 5: 132045843 0.166 G .865 .955
Clock PER3 rs228654 Intron 1: 7837168 0.117 T .872 1.058
Clock ARNTL2 rs16931937 Intron 12: 27439458 0.076 C .882 .944
Clock PER2 rs2304673 Intron 2: 238850661 0.148 C .901 1.039
Clock FBXL3 rs599115 Intron 13: 76487726 0.322 A .941 1.016
Clock ARNTL2 rs4964059 Intron 12: 27420486 0.354 C .953 1.013
Clock ARNTL2 rs4964060 Intron 12: 27424634 0.414 A .964 .990
Inflammation IL4 rs2243248 5’ Flanking 5: 132036543 0.059 G .974 .985
Clock PER3 rs10462018 Intron 1: 7802214 0.147 T 1.000 1.000
Clock ARNTL2 rs11048998 Intron 12: 27437644 0.133 C 1.000 1.000

Chr, chromosome; SNP, single nucleotide polymorphism; MA, minor allele; MAF, minor allele frequency; Sig., significance