Table 4.
Construct Prefix (_lcpl :Cre-P2A-EGFP-CAAX) | Forward Primers | Primer Pair Annealing Temp (Ta)* |
---|---|---|
−822 | 5’ TGC ATT ACA TAC AGG AAC AGC GG 3’ | 68 °C |
−658 | 5’ AAA CTG CAT GCT GTG ATT ACT TC 3’ | 64 °C |
−481 | 5’ AAA CTG ATA TGT GTG AGC TGA CCT 3’ | 67 °C |
−169 | 5’ TCA TCA CTG AAC ACT GAC TGC A 3’ | 67 °C |
0, ‘Kozak only’ | 5’ AAA CAT GGC GAA TTT ACT GAC GG 3’ | 68 °C |
Reverse Primer | ||
All constructs | 5’ GTC TCT GTA CTG ACC GAC TTT AGT GA 3’ |
We calculated annealing temperatures for these reactions using the manufacturer’s on-line calculator (tmcalculator.neb.com) which is recommended for the specific
polymerase used (Q5 High-Fidelity 2× Master Mix, New England Biolabs).