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. 2019 Jul 24;6:131. doi: 10.1038/s41597-019-0131-5

Table 2.

Statistics of somatic mutations detected by whole exome sequencing of CRC tumours.

Patienta Frameshift insertion Frameshift deletion Frameshift substitution Stopgain Stoploss Nonframeshift insertion Nonframeshift deletion Nonframeshift substitution Missense SNVb Synonymous SNVb Unknown Total
P0123 27 129 0 51 2 0 4 0 869 389 1 1,472
P0825 125 422 0 56 3 5 35 0 1,181 494 2 2,323
P0909 114 190 0 46 3 0 3 0 1,440 582 0 2,378
P0413 27 156 0 60 0 1 11 0 929 427 3 1,614
P0215 5 22 0 9 1 6 14 0 79 42 0 178
P0411 2 6 0 6 0 1 2 0 68 29 0 114
P0701 2 3 0 11 0 2 0 0 102 46 0 166
P1012 4 11 0 10 0 0 2 0 180 63 0 270
P1207 2 5 0 3 0 1 7 0 59 36 0 113
P1212 6 5 0 4 0 2 3 0 135 52 0 207
P1228 3 7 0 7 0 0 1 0 88 46 0 152
P0309 0 1 0 2 0 0 0 0 40 15 0 58

Somatic mutations were detected by variant caller Strelka and were annotated with ANNOVAR.

aMSI pateints are labelled in bold.

bSNV,single nucleotide variant.