Table 1. List of primer pairs for detection of each target used in this study.
| Target specificity | Primer names | Nucleotide sequences | References |
|---|---|---|---|
| EcPV1 L1 | EPV-F | 5′-TGCGTTCGCCCCAATAGTCATCTT-3′ | [17] |
| EPV-R | 5′-ACCGCCCGCCTCACCCTTGTC-3′ | ||
| EcPV2 L1 | EcPV2 f | 5′-CAGACTTGTCTGGGCTCTCC-3′ | [11] |
| EcPV2 r | 5′-TCCCGCCTAGCATAGAAGAA-3′ | ||
| EcPV3 L1 | EcPV3-For | 5′-CGTTAAGCGGCCTTCCCCCTC-3′ | [6] |
| EcPV3-Rev | 5′-GCTTTAGCACGCAAGCCCGC-3′ | ||
| EcPV4 L1 | EcPV4-For | 5′-AGCTGACGTCCCATTAGACTTGGT-3′ | [6] |
| EcPV4-Rev | 5′-GCAGGTGCGCCACTGTCTCA-3′ | ||
| consensus EcPV L1 | EcPVF | 5′-CCDGCHHTBGGNGAGTAYTGG-3′ | [3] |
| EcPVR | 5′-TGCCAGCANARNCCATTGTT-3′ | ||
| animal and human PV L1 | FAP59 | 5′-TAACWGTIGGICAYCCWTATT-3′ | [5] |
| FAP64 | 5′-CCWATATCWVHCATITCICCATC-3′ | ||
| equine β-actin | β-actin For | 5′-CATTGTCCACCTTCCAGCAGATGT-3′ | [6] |
| β-actin Rev | 5′-CTAGAAGCATTTGCGGTGGACGAT-3′ |
EcPV: Equus caballus papillomavirus 2. For, forward; Rev, reverse.