Table 2.
List of unique matrix families matching on a particular RDR promoter sequence of the specific plant
| TF matrix family | RDR1 | RDR2 | RDR3 | RDR4 | RDR5 | RDR6 |
|---|---|---|---|---|---|---|
| P$PNRE | – | – | – | – | – | Ca |
| P$MYCL | – | – | – | – | St, Ps | – |
| P$GLKF | – | – | – | – | Na | – |
| P$GCCF | – | – | – | Al | – | – |
| P$SRSF | – | – | – | Os | – | – |
| P$TCPF | – | – | – | Os | – | – |
| O$INRE | – | – | – | Al | – | – |
| P$GARP | – | Na | – | – | – | – |
| P$KAN1 | – | Nt | – | – | – | – |
| P$RAV5 | – | Gh | – | – | – | – |
| P$SEF4 | – | Pt | – | – | – | – |
| P$TALE | – | Ah | – | – | – | – |
| P$TOEF | – | Ca | – | – | – | – |
| P$WOXF | – | Sl | – | – | – | – |
| P$ZFAT | – | Gm | – | – | – | – |
| O$TF2B | – | – | Os | – | – | – |
| P$FRSF | – | – | Ah | – | – | – |
| P$IBOX | – | – | Gm | – | – | – |
| P$RAV3 | – | – | Al | – | – | – |
| P$GBOX | Gh | – | – | – | – | – |
Ah = Arachis hypogaea, Al = Arabidopsis lyrata, Ca = Capsicum annuum, Gh = Gossypium hirsutum, Gm = Glycine max, Na = Nicotiana attenuata, Nt = Nicotiana tabacum, Os = Oryza sativa, Pt = Populus trichocarpa, Sl = Solanum lycopersicum, St = Solanum tuberosum “–” indicates TF not found on promoters of respective RDRs. (‘P$’ denotes plants and ‘O$’ denotes general core promoter elements)