Table 3.
Virulence genes among major serotypes and clonal complexes (%).
Categories | cps2A | cbpA | pspA | nanA | piaA | lytA | ply | psaA | pavA | spxB | htrA | clpP | Total | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | |
Source | ||||||||||||||||||||||||||
CAP | 111 | 45.7 | 107 | 44 | 83 | 34.2 | 234 | 96.3 | 241 | 99.2 | 243 | 100 | 243 | 100 | 243 | 100 | 243 | 100 | 243 | 100 | 243 | 100 | 243 | 100 | 243 | 84.7 |
HAP | 16 | 36.4 | 20 | 45.5 | 14 | 31.8 | 42 | 95.5 | 43 | 97.7 | 44 | 100 | 44 | 100 | 44 | 100 | 44 | 100 | 44 | 100 | 44 | 100 | 44 | 100 | 44 | 15.3 |
P = 0.252 | P = 0.861 | P = 0.763 | P = 1.000 | P = 0.394 | - | - | - | - | - | - | - | |||||||||||||||
Serotypes | ||||||||||||||||||||||||||
19F | 6 | 6.3 | 83 | 86.5 | 7 | 7.3 | 96 | 100 | 95 | 99 | 96 | 100 | 96 | 100 | 96 | 100 | 96 | 100 | 96 | 100 | 96 | 100 | 96 | 100 | 96 | 33.4 |
6A | 10 | 29.4 | 2 | 5.9 | 30 | 88.2 | 34 | 100 | 34 | 100 | 34 | 100 | 34 | 100 | 34 | 100 | 34 | 100 | 34 | 100 | 34 | 100 | 34 | 100 | 34 | 11.8 |
6B | 4 | 17.4 | 0 | 0 | 18 | 78.3 | 23 | 100 | 23 | 100 | 23 | 100 | 23 | 100 | 23 | 100 | 23 | 100 | 23 | 100 | 23 | 100 | 23 | 100 | 23 | 8.0 |
19A | 28 | 100 | 25 | 89.3 | 2 | 7.1 | 27 | 96.4 | 28 | 100 | 28 | 100 | 28 | 100 | 28 | 100 | 28 | 100 | 28 | 100 | 28 | 100 | 28 | 100 | 28 | 9.8 |
23F | 13 | 54.2 | 3 | 12.5 | 7 | 29.2 | 20 | 83.3 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 8.4 |
14 | 24 | 100 | 24 | 100 | 4 | 16.7 | 24 | 100 | 23 | 95.8 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 100 | 24 | 8.4 |
p = 0.000 | p = 0.000 | p = 0.000 | p = 0.001 | p = 0.597 | - | - | - | - | - | - | - | |||||||||||||||
Clonal complexes | ||||||||||||||||||||||||||
CC271 | 35 | 28.5 | 96 | 78.0 | 10 | 8.1 | 121 | 98.4 | 121 | 98.4 | 123 | 100 | 123 | 100 | 123 | 100 | 123 | 100 | 123 | 100 | 123 | 100 | 123 | 100 | 123 | 42.9 |
P = 0.000 | P 0.000 | P 0.000 | P = 0.169 | P = 0.802 | - | - | - | - | - | - | - | |||||||||||||||
Total | 127 | 44.3 | 127 | 44.3 | 97 | 33.8 | 276 | 96.2 | 284 | 99.0 | 287 | 100 | 287 | 100 | 287 | 100 | 287 | 100 | 287 | 100 | 287 | 100 | 287 | 100 | 287 | 100 |