Table 5.
Mapping statistics for sea cucumber miRNA types from Illumina sequencing reads
| Type | Control (CTR) | % of total | Salt stress (SSR) | % of total |
|---|---|---|---|---|
| Raw reads | 8,133,756 | 100.00% | 7,650,042 | 100.00% |
| Clean reads | 8,005,507 | 98.42% | 7,491,540 | 97.93% |
| Small RNA reads after length filter | 7,928,444 | 99.04% | 7,188,397 | 95.96% |
| Total mapped small RNA | 7,525,099 | 94.91% | 6,950,055 | 96.68% |
| Mapped novel miRNA | 411 | 0.0055 | 283 | 0.0041 |
| Mapped mature | 48 | 0.0006 | 41 | 0.0006 |
| Mapped hairpin | 56 | 0.0007 | 51 | 0.0007 |
| Mapped uniq sRNA | 411 | 0.0055 | 283 | 0.0041 |
| Mapped known miRNA | 360 | 0.0048 | 306 | 0.0044 |
| Mapped mature | 32 | 0.0004 | 31 | 0.0004 |
| Mapped hairpin | 32 | 0.0004 | 30 | 0.0004 |