Table 1.
Species of Pristimantis included in this analysis. For each specimen, we provide the museum number, source, locality and GenBank accession number. (*) indicates the outgroup taxa. Museum abbreviations are as follows: MZUA (Museo de Zoología-Universidad del Azuay, Ecuador), MUTPL (Museo de Zoología, Universidad Técnica Particular de Loja, Ecuador), MEPN (Museo de Historia Natural de la Escuela Politecnica Nacional, Ecuador), KU (Kansas Museum of Natural History, USA), QCAZ (Museo de Zoología-Pontificia Universidad Católica del Ecuador, Ecuador), DHMECN (Departamento de Herpetologia, Instituto Nacional de Biodiversidad del Ecuador, Ecuador).
| Species | Museum number | GenBank accession number | Locality | ||
| 12S | 16S | RAG–1 | |||
| Pristimantis andinognomus | QCAZ45661 | – | KY967671 | KY967690 | Ecuador: Zamora Chinchipe, Tapichalaca Reserve |
| QCAZ45534 | – | KY967669 | KY967688 | Ecuador: Loja, Podocarpus National Park, guardianía Cajanuma | |
| P. bambu | QCAZ46744 | – | KY967659 | KY967693 | Ecuador: Cañar, Reserva Mazar |
| QCAZ46708 | – | KY967673 | – | Ecuador: Cañar, Reserva Mazar | |
| P. cajanuma | MUTPL160 | MK993333 | MK604537 | – | Ecuador: Loja, Cajanuma, Podocarpus National Park, Los Miradores Trail |
| MUTPL157 | MK993331 | MK604535 | – | Ecuador: Loja, Cajanuma, Podocarpus National Park, Los Miradores Trail | |
| MUTPL158 | MK993332 | MK604536 | MK602184 | Ecuador: Loja, Cajanuma, Podocarpus National Park, Los Miradores Trail | |
| P. ceuthospilus | KU212216 | EF493520 | EF493520 | – | Peru: Cajamarca, Chota, 12 km W Llama |
| P. chalceus | KU177638 | EF493675 | EF493675 | – | Ecuador: Carchi, Maldonado |
| P. cryophilius | KU217863 | EF493672 | EF493672 | – | Ecuador: Azuay, 4 km W Laguna Torcadorn |
| P. diadematus | KU221999 | EU186668 | EU186668 | – | Peru: Loreto, Teniente Lopez |
| P. galdi | QCAZ32368 | EU186670 | EU186670 | EU186746 | Ecuador: Zamora Chinchipe, El Pangui |
| P. imitatrix | KU215476 | EF493824 | EF493667 | – | Peru: Madre de Dios, Cuzco Amazonico, 15 km E Puerto Maldonado |
| P. mazar | QCAZ27559 | – | KY967664 | KY967683 | Ecuador: Cañar, Reserva Mazar, La Libertad |
| QCAZ27572 | JF906315 | KY967666 | KY967685 | Ecuador: Cañar, Reserva Mazar, La Libertad | |
| P. melanogaster | MHNSM56846 | EF493826 | EF493664 | – | Peru: Amazonas, N. Slobe Abra Barro Negro, 28 km SSW Leimebambe |
| P. muranunka | MEPN14737 | – | KY967661 | KY967680 | Ecuador: Zamora Chinchipe, Cerro Plateado |
| MEPN14722 | – | KY967660 | KY967679 | Ecuador: Zamora Chinchipe, Cerro Plateado | |
| P. orestes | KU218257 | EF493388 | EF493388 | – | Ecuador: Azuay, 7 km E Sigsig |
| QCAZ45464 | JF906323 | – | – | Ecuador: Loja, Podocarpus National Park, guardianía Cajanuma | |
| QCAZ45646 | JF906324 | – | – | Ecuador: Loja, Podocarpus National Park, guardianía Cajanuma | |
| MUTPL242 | MK604538 | MK602185 | Ecuador, Loja, 11 km NE Urdaneta | ||
| MUTPL248 | MK993330 | MK604539 | MK602186 | Ecuador, Loja, 11 km NE Urdaneta | |
| MUTPL249 | MK604540 | – | Ecuador, Loja, 11 km NE Urdaneta | ||
| MZUA.AN.2488 | MK604545 | MK602190 | Ecuador, Loja, 11 km NE Urdaneta | ||
| QCAZ45556 | – | KY967670 | KY967689 | Ecuador: Loja, Podocarpus National Park, Lagunas del Compadre | |
| P. parvillus | KU177821 | EF493352 | EF493352 | – | Ecuador: Pichincha |
| P. phoxocephalus | KU218025 | EF493349 | EF493349 | – | Ecuador: Chimborazo, 70 km W Riobamba via Pallatanga |
| P. quintanai | MZUA.AN.1748 | – | MK604542 | MK602187 | Ecuador: Cañar, Rivera |
| MZUA.AN.1881 | MK993335 | MK604541 | MK602188 | Ecuador: Cañar, Comunidad Guangras | |
| MZUA.AN.1878 | MK993334 | MK604543 | – | Ecuador: Cañar, Guangras | |
| MZUA.AN.2705 | MK993337 | MK604546 | MK602191 | Ecuador: Cañar, Llavircay | |
| MZUA.AN.1900 | MK993336 | MK604544 | MK602189 | Ecuador: Cañar, Llavircay | |
| P. rhodoplichus | KU219788 | EF493674 | EF493674 | – | Peru: Piura, Le Tambo |
| P. saturninoi | DHMECN 12237 | MK993329 | MK604534 | – | Ecuador: Morona–Santiago, Sangay National Park |
| DHMECN 12232 | MK993327 | MK604533 | – | Ecuador: Morona–Santiago, Sangay National Park | |
| DHMECN 12214 | MK993328 | MK604532 | – | Ecuador: Morona–Santiago, Sangay National Park | |
| P. simonbolivari | QCAZ56567 | KY967676 | KY967695 | Ecuador: Bolívar, Bosque Protector Cashca Totoras | |
| KU218254 | EF493671 | EF493671 | – | Ecuador: Bolívar, Bosque Protector Cashca Totoras | |
| P. simonsii | KU212350 | EU186665 | EU186665 | – | Peru: Cajamarca, S slope Abra Quilsh, 28 km NNW Cajamarca |
| Pristimantis sp. | QCAZ56535 | – | KY967675 | KY967694 | Ecuador: Azuay, Laguna Patococha |
| Pristimantis sp. | DHMECN3112 | – | KY967658 | KY967677 | Ecuador: Zamora Chinchipe, Reserva Tapichalaca |
| P. spinosus | KU218052 | EF493673 | EF493673 | – | Ecuador: Morona–Santiago, 10.6 km W Plan de Milogio |
| P. tiktik | MUTPL239 | MH668274 | MH668275 | MH708575 | Ecuador: Loja, 21 km E Urdaneta |
| MUTPL247 | MH668161 | MH668276 | MH708576 | Ecuador: Loja, 14 km E Urdaneta | |
| P. unistrigatus | KU218057 | EF493387 | EF493387 | EF493444 | Ecuador: Imbabura, 35 km E Pquela |
| Lynchius flavomaculatus | KU218210* | EU186667 | EU186667 | EU186745 | Ecuador: Morona–Santiago, Yangana |
| Strabomantis biporcatus | CVULA7073* | EU186691 | EU186691 | EU186754 | Venezuela: Sucre, Parque Nacional de Paria, Les Melenas, Peninsula de Paria |