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. 2019 Jul 19;10:813. doi: 10.3389/fphar.2019.00813

Table 1.

The inhibiting oligonucleotides and IC50 values for hydrolysis of RNA target.

Inhibitor Sequence, 5’-3’ IC50, nM
r-inh 5’-r(CAAGCAGCCUACCC) 12 ± 4
m-inh 5’-CmAmAmGmCmAmGmCmCmUmAmCmCmCm 90 ± 30
d-inh 5’-d(CAAGCAGCCTACCC) 270 ± 90
pgd-inh1 5’-d(CxAxAxGxCxAxGxCxCxTxAxCxCxCx)-RNH2 No effect
pgd-inh2 5’-d(CxAxAxGxCxAxGxCCTACCC) 400 ± 100
pgd-inh3 5’-d(CAAGCAGCxCxTxAxCxCxC) 100 ± 40

The cleavage conditions: 5 nM M1 RNA, 50 nM C5 protein, 100 nM fluorescent RNA target, 0-125 nM inhibiting oligonucleotide, 10 mM Tris-HCl, pH 7.5, 10 mM MgCl2, 100 mM NH4Cl, 37°C. Nm – 2’-O-methylribonucleotide; Nx – phosphoryl guanidine deoxyribonucleotide; x - phosphate groups modified with 1,3-dimethylimidazolidine-2-imine residues, RNH2 = –(CH2)6NH2. The results represent mean values (± SD) from two independent experiments.