Table 1.
Family -Individual |
Ancestry | Nucleotide alteration |
Alteration in coding sequencea |
Zygosity | Continuous AA sequence Conservation |
SIFT/ PP2 | Presenting symptoms (Age) |
Renal Histology |
eGFR at presentation /ESRD age |
Extra-renal phenotype |
---|---|---|---|---|---|---|---|---|---|---|
AN10 -21 (index family) |
Arab | c.69–70InsG b | p.Val26Glyfs*28 | Het | Truncating | Deleterious/ 1 (reported) |
Elevated creatinine and proteinuria (2y) | FSGS | ESRD at age 4y | Coloboma, Cardiomyopathy, microcephaly |
A4041 -11 |
Egypt | c.254G>T | p.Gly85Val | Het | Danio rerio | Deleterious/ 1 (novel) |
Proteinuria and elevated Creatinine | n/a | ESRD at age 39y |
- |
A4041 -23 |
Egypt | c.254G>T | p.Gly85Val | Het | Danio rerio | Deleterious/ 1 (novel) |
Proteinuria and elevated Creatinine (16y) | FSGS | 63 ml/min/1.73m2 | - |
A4041 -24 |
Egypt | c.254G>T | p.Gly85Val | Het | Danio rerio | Deleterious/ 1 (novel) |
Edema, proteinuria and elevated Creatinine (14y) | FSGS | 50 ml/min/1.73m2 | - |
A5089 -11 |
Europe | c.862–1G>A | Splice mutation | Het | Splice | Obligatory splice b (novel) | Proteinuria and normal Creatinine | n/a | n/a | - |
A5089 -21 |
Europe | c.862–1G>A c | Splice mutation | Het | Splice | Obligatory splice (novel) |
Edema, proteinuria and elevated Creatinine (20) | FSGS | ESRD at age 27 | - |
A5281 | Europe | c.275C>T | p.Thr92Met | Het | Danio rerio | Deleterious/ 1 (novel) |
HTN found on screening (18) |
FSGS | n/a d | Cryptorchidism |
All mutations had a PolyPhen2 (PP2) and SIFT score of functional ‘deleteriousness’ (http://genetics.bwh.harvard.edu/pph2; http://sift.jcvi.org/ )
This mutation has been previously reported as disease causing.
This mutation is predicted to change conserved donor site and to be deleterious using 3 different in silico splice prediction software (MaxEnt, NNSPLICE and HSF).
Patients’ mother and maternal grandfather went to ESRD at age 50y and 70 y respectively
ESRD, end stage renal disease; FSGS, focal segmental glomerusclerosis; Het, heterozygous; HTN, hypertension; n/a, not available; pt. patient.