Table 1.
S.N. | Primer | Nucleotide sequence (5' to 3') | Position (nt) | Polarity |
---|---|---|---|---|
Pre-S gene | ||||
1 | PS1 | GGGTCACCTTATTCTTGGGA | 2814–2833 | F |
2 | PS2 | CCCCGCCTGTAACACGAGCA | 208–189 | R |
3 | PS3 | TTGGGAACAAGATCTACAGC | 2828–2847 | F |
4 | PS4 | GTCCTGATGCGATGTTCTCC | 176–157 | R |
5 | PS-B1 | ATTCAAAGCCAACTCAGAAA | 2946–2965 | F |
6 | PS-B2 | ACAGTATTCTGAGCAGGGCTC | 105–85 | R |
Pre-core/core region | ||||
1 | PC1 | ACATAAGAGGACTCTTGGAC | 1652–1671 | F |
2 | PC2 | GAAGGAAAGAAGTCAGAAGGC | 1977–1957 | R |
3 | PC3 | TACTTCAAAGACTGTGTGTTTA | 1704–1725 | F |
4 | PC4 | GTCAGAAGGCAAAAAAGAGA | 1966–1947 | R |
F, forward; R, reverse