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. 2019 Feb 4;13(1):21. doi: 10.1186/s13065-019-0525-7

Table 2.

Binding free energy calculation of protein-proanthocyanidin and 5-FU complex using MM/GBSA method

Protein Binding free energy
Proanthocyanidin 5-Fluorouracil
∆GaCoulomb ∆Gbvdw ∆GcsolLipo ∆Gdbind ∆GaCoulomb ∆Gbvdw ∆GcsolLipo ∆Gdbind
BCL-2 − 27.27 − 39.34 − 28.89 − 60.02 − 16.92 − 9.57 − 1.98 − 23.49
BCL-XL − 30.80 − 35.47 − 30.26 − 52.51 − 5.58 − 39.14 − 51.04 − 77.35
CDK2 − 13.06 − 45.88 − 24.29 − 64.85 − 13.06 − 45.88 − 24.29 − 64.85
CDK4 − 32.14 − 24.90 − 37.40 − 62.71 − 6.4 − 19.22 − 3.45 − 15.66

All the energy values in kilocalories per mole (kcal/mol)

aContribution to the free energy of binding from the Coulomb energy

bContribution to the free energy of binding from the van der Waals energy

cContribution to the free energy of binding from the lipophilic energy

dFree energy of binding