Table 1.
Genes present in the cp genome of Salix wilsonii.
| Gene category | Group of genes | Name of genes | ||||
|---|---|---|---|---|---|---|
| Self-replication | Ribosomal RNA genes | rrn16 | rrn23 | rrn4.5 | rrn5 | |
| Transfer RNA genes | trnA-UGC | trnC-GCA | trnD-GUC | trnE-UUC | trnF-GAA | |
| trnfM-CAU | trnG-GCC | trnG-UCC | trnH-GUG | trnI-CAU | ||
| trnI-GAU | trnK-UUU | trnL-CAA | trnL-UAA | trnL-UAG | ||
| trnM-CAU | trnN-GUU | trnP-UGG | trnQ-UUG | trnR-ACG | ||
| trnR-UCU | trnS-GCU | trnS-GGA | trnS-UGA | trnT-GGU | ||
| trnT-UGU | trnV-GAC | trnV-UAC | trnW-CCA | trnY-GUA | ||
| Large subunit of ribosome (LSU) | rpl2 | rpl14 | rpl16 | rpl20 | rpl22 | |
| rpl23 | rpl33 | rpl36 | ||||
| Small subunit of ribosome (SSU) | rps2 | rps3 | rps4 | rps7 | rps8 | |
| rps11 | rps12 | rps14 | rps15 | rps18 | ||
| rps19 | ||||||
| RNA polymerase | rpoA | rpoB | rpoC1 | rpoC2 | ||
|
| ||||||
| Genes for photosynthesis | Photosystem h | psaA | psaB | psaC | psaI | psaJ |
| Photosystem II | psbA | psbB | psbC | psbD | psbE | |
| psbF | psbH | psbI | psbJ | psbK | ||
| psbL | psbM | psbN | psbT | psbZ | ||
| Cytochrome b/f complex | petA | petB | petD | petG | petL | |
| petN | ||||||
| ATP synthase | atpA | atpB | atpE | atpF | atpH | |
| atpI | ||||||
| ATP-dependent protease subunit p | clpP | |||||
| Large subunit of rubisco | rbcL | |||||
| NADH dehydrogenase | ndhA | ndhB | ndhC | ndhD | ndhE | |
| ndhF | ndhG | ndhH | ndhI | ndhJ | ||
| ndhK | ||||||
|
| ||||||
| Other genes | Maturase | matK | ||||
| Envelop membrane protein | cemA | |||||
| Subunit of acetyl-CoA-carboxylase | accD | |||||
| C-type cytochrome synthesis gene | ccsA | |||||
|
| ||||||
| Unknown function | Hypothetical chloroplast reading frames | ycf1 | ycf2 | ycf3 | ycf4 | ycf15 |
| orf42 | orf56 | |||||
| Pseudogene | pseudo-infA | pseudo-ycf68 | pseudo-ycf1 | |||