Table 2.
Whole genome information of E. coli GSH8M-2 from WWTP effluent
| Replicon | GC% | Length (bp) | MLST | Inc type | Drug Resistance Gene | GenBank ID |
|---|---|---|---|---|---|---|
| Chromosome | 50.9 | 4,693,292 | ST542 | – | aadA5, blaEC, dfrA17 | AP019675 |
| pGSH8M-2–1 | 51.0 | 145,389 | – | IncFIB(AP001918), IncFII, IncFII(pSE11) | blaTEM-135, dfrA14, floR, qnrS1, tet(A) ×2 | AP019676 |
| pGSH8M-2–2 | 52.4 | 75,556 | – | IncFII(pCoo) | floR | AP019677 |
| pGSH8M-2–3 | 46.3 | 49,365 | – | IncX1 | aph(3ʹ)-Ia, blaCTX-M-55, floR, fosA3, qnrS2 | AP019678 |
| pGSH8M-2–4 | 46.7 | 46,158 | – | IncX3 | blaNDM-5 | AP019679 |
| pGSH8M-2–5 | 43.2 | 3,274 | – | Col440I | – | AP019680 |
| pGSH8M-2–6 | 46.9 | 3,067 | – | Col440I | – | AP019681 |
Note: –, not availabale
Abbreviations: AMR, antimicrobial resistance; CPE, carbapenemase-producing Enterobacteriaceae; NDM, New Delhi metallo-β-lactamase; WWTP, wastewater treatment plant; ST, Sequence type; AMS, ampicillin-sulbactam; CEP, cefepime; CTA, cefotaxime; CTZ, ceftazidime; IMI, imipenem; MER, meropenem; AZT, aztreonam; AMI, amikacin; GEN, gentamicin; TOB, tobramycin; TET, tetracycline; CIP, ciprofloxacin; LEV, levofloxacin; AZI, azithromycin; TRS, trimethoprim-sulfamethoxazole; CHL, chloramphenicol; COL, colistin; MLST, Multilocus Sequence Typing.