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Representation of a neuron topological structure after clustering into 5 subtrees (top); and memory layouts for the pre- and post-subtree clustering phases presented in Figure 5 (bottom). Morphology includes 17 compartments, and 9 instances (mech 1–9) of a mechanism type with state variables x, y, and z. Distinct mechanism types and solver parameters a, b, p, d, v, and rhs were omitted for simplicity.
