TABLE 1.
Unbiased proteomics analysis of myotubes treated with AmAc for 24 h compared to untreated cellsa
| NCBI accession no. | Protein | Designation | Mol wt (kDa) | LFQ intensity at 24 h |
LFQ intensity for Ct |
Ratio of 24-h/Ct LFQ intensity | P value by t test | MS/MS count | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Expt 1 | Expt 2 | Expt 3 | Avg | Expt 1 | Expt 2 | Expt 3 | Avg | |||||||
| P60867 | 40S ribosomal protein S20 | Rps20 | 13.373 | 1.81E+09 | 1.91E+09 | 1.87E+09 | 1.86E+09 | 2.07E+09 | 1.97E+09 | 2.04E+09 | 2.03E+09 | 0.92 | 0.018 | 152 |
| P63325 | 40S ribosomal protein S10 | Rps10 | 18.916 | 4.04E+08 | 4.42E+08 | 4.33E+08 | 4.26E+08 | 4.64E+08 | 5.07E+08 | 4.97E+08 | 4.89E+08 | 0.87 | 0.022 | 117 |
| P62242 | 40S ribosomal protein S8 | Rps8 | 24.205 | 2.17E+09 | 2.73E+09 | 2.46E+09 | 2.46E+09 | 2.85E+09 | 3.19E+09 | 3.01E+09 | 3.02E+09 | 0.81 | 0.040 | 300 |
| P62754 | 40S ribosomal protein S6 | Rps6 | 28.68 | 1.55E+09 | 1.90E+09 | 1.75E+09 | 1.74E+09 | 2.35E+09 | 2.29E+09 | 2.34E+09 | 2.32E+09 | 0.75 | 0.005 | 251 |
| P62267 | 40S ribosomal protein S23 | Rps23 | 15.807 | 5.13E+08 | 6.54E+08 | 5.60E+08 | 5.76E+08 | 7.20E+08 | 7.31E+08 | 9.23E+08 | 7.92E+08 | 0.73 | 0.050 | 133 |
| P62281 | 40S ribosomal protein S11 | Rps11 | 18.431 | 1.24E+09 | 1.37E+09 | 1.27E+09 | 1.29E+09 | 1.82E+09 | 1.49E+09 | 1.41E+09 | 1.57E+09 | 0.82 | 0.100 | 198 |
| P62855 | 40S ribosomal protein S26 | Rps26 | 13.015 | 6.72E+08 | 7.12E+08 | 6.49E+08 | 6.77E+08 | 6.86E+08 | 8.06E+08 | 7.41E+08 | 7.44E+08 | 0.91 | 0.164 | 78 |
| P63276 | 40S ribosomal protein S17 | Rps17 | 15.524 | 1.54E+09 | 1.58E+09 | 1.65E+09 | 1.59E+09 | 1.65E+09 | 1.63E+09 | 1.84E+09 | 1.71E+09 | 0.93 | 0.190 | 165 |
| P25444 | 40S ribosomal protein S2 | Rps2 | 31.231 | 1.58E+09 | 1.77E+09 | 1.69E+09 | 1.68E+09 | 1.90E+09 | 1.72E+09 | 1.75E+09 | 1.79E+09 | 0.94 | 0.219 | 232 |
| P62264 | 40S ribosomal protein S14 | Rps14 | 16.273 | 1.53E+09 | 1.65E+09 | 1.56E+09 | 1.58E+09 | 1.74E+09 | 1.53E+09 | 1.65E+09 | 1.64E+09 | 0.96 | 0.435 | 154 |
| P62274 | 40S ribosomal protein S29 | Rps29 | 6.6767 | 5.77E+08 | 6.43E+08 | 5.40E+08 | 5.87E+08 | 6.81E+08 | 6.02E+08 | 5.73E+08 | 6.19E+08 | 0.95 | 0.512 | 56 |
| P62301 | 40S ribosomal protein S13 | Rps13 | 17.222 | 5.37E+08 | 4.54E+08 | 4.94E+08 | 4.95E+08 | 6.56E+08 | 4.41E+08 | 4.94E+08 | 5.30E+08 | 0.93 | 0.634 | 120 |
| P27659 | 60S ribosomal protein L3 | Rpl3 | 46.109 | 2.41E+09 | 2.73E+09 | 2.56E+09 | 2.56E+09 | 3.05E+09 | 3.08E+09 | 3.09E+09 | 3.07E+09 | 0.83 | 0.005 | 377 |
| Q9CPR4 | 60S ribosomal protein L17 | Rpl17 | 21.423 | 1.37E+09 | 1.60E+09 | 1.36E+09 | 1.44E+09 | 1.88E+09 | 1.79E+09 | 1.70E+09 | 1.79E+09 | 0.81 | 0.023 | 225 |
| P47963 | 60S ribosomal protein L13 | Rpl13 | 24.305 | 1.84E+09 | 2.10E+09 | 1.96E+09 | 1.97E+09 | 2.44E+09 | 2.50E+09 | 2.69E+09 | 2.54E+09 | 0.77 | 0.006 | 229 |
| Q9Z2Q5 | 39S ribosomal protein L40, mitb | Mrpl40 | 24.301 | 5.55E+07 | 4.90E+07 | 4.49E+07 | 4.98E+07 | 6.26E+07 | 7.00E+07 | 6.07E+07 | 6.45E+07 | 0.77 | 0.025 | 46 |
| P41105 | 60S ribosomal protein L28 | Rpl28 | 15.733 | 5.35E+08 | 6.39E+08 | 5.51E+08 | 5.75E+08 | 7.57E+08 | 7.45E+08 | 7.53E+08 | 7.52E+08 | 0.77 | 0.006 | 156 |
| P61255 | 60S ribosomal protein L26 | Rpl26 | 17.258 | 5.93E+08 | 7.08E+08 | 6.82E+08 | 6.61E+08 | 9.70E+08 | 9.00E+08 | 8.02E+08 | 8.91E+08 | 0.74 | 0.019 | 141 |
| P62717 | 60S ribosomal protein L18a | Rpl18a | 20.732 | 2.82E+08 | 3.72E+08 | 3.69E+08 | 3.41E+08 | 4.67E+08 | 4.90E+08 | 5.20E+08 | 4.92E+08 | 0.69 | 0.010 | 108 |
| P12970 | 60S ribosomal protein L7a | Rpl7a | 29.976 | 6.47E+08 | 6.23E+08 | 6.11E+08 | 6.27E+08 | 9.71E+08 | 9.43E+08 | 8.53E+08 | 9.22E+08 | 0.68 | 0.001 | 191 |
| P47911 | 60S ribosomal protein L6 | Rpl6 | 33.509 | 1.35E+09 | 1.65E+09 | 1.53E+09 | 1.51E+09 | 2.33E+09 | 2.27E+09 | 2.14E+09 | 2.25E+09 | 0.67 | 0.002 | 246 |
| Q6ZWV7 | 60S ribosomal protein L35 | Rpl35 | 14.552 | 3.94E+08 | 5.16E+08 | 4.34E+08 | 4.48E+08 | 6.72E+08 | 7.17E+08 | 6.46E+08 | 6.78E+08 | 0.66 | 0.005 | 73 |
| P62918 | 60S ribosomal protein L8 | Rpl8 | 28.024 | 9.82E+08 | 1.28E+09 | 1.12E+09 | 1.13E+09 | 1.82E+09 | 1.59E+09 | 1.78E+09 | 1.73E+09 | 0.65 | 0.006 | 205 |
| Q8BP67 | 60S ribosomal protein L24 | Rpl24 | 17.779 | 3.58E+08 | 4.28E+08 | 3.97E+08 | 3.94E+08 | 6.99E+08 | 6.28E+08 | 6.35E+08 | 6.54E+08 | 0.60 | 0.001 | 110 |
| Q9D1R9 | 60S ribosomal protein L34 | Rpl34 | 13.293 | 1.38E+08 | 1.62E+08 | 1.75E+08 | 1.58E+08 | 3.30E+08 | 2.45E+08 | 2.56E+08 | 2.77E+08 | 0.57 | 0.014 | 48 |
| Q9CR57 | 60S ribosomal protein L14 | Rpl14 | 23.564 | 1.84E+08 | 1.79E+08 | 1.99E+08 | 1.87E+08 | 3.77E+08 | 3.54E+08 | 2.95E+08 | 3.42E+08 | 0.55 | 0.004 | 75 |
| P35980 | 60S ribosomal protein L18 | Rpl18 | 21.644 | 1.65E+08 | 2.64E+08 | 1.81E+08 | 2.03E+08 | 3.06E+08 | 4.06E+08 | 5.40E+08 | 4.17E+08 | 0.49 | 0.045 | 92 |
| P14148 | 60S ribosomal protein L7 | Rpl7 | 31.419 | 3.59E+08 | 5.29E+08 | 3.65E+08 | 4.18E+08 | 7.76E+08 | 8.50E+08 | 9.51E+08 | 8.59E+08 | 0.49 | 0.004 | 161 |
| P47964 | 60S ribosomal protein L36 | Rpl36 | 12.215 | 3.93E+08 | 4.58E+08 | 4.83E+08 | 4.45E+08 | 5.49E+08 | 5.12E+08 | 6.25E+08 | 5.62E+08 | 0.79 | 0.052 | 93 |
| P19253 | 60S ribosomal protein L13a | Rpl13a | 23.464 | 5.08E+08 | 7.59E+08 | 5.99E+08 | 6.22E+08 | 7.35E+08 | 7.91E+08 | 7.84E+08 | 7.70E+08 | 0.81 | 0.121 | 157 |
| P62892 | 60S ribosomal protein L39 | Rpl39 | 6.4066 | 3.29E+08 | 3.83E+08 | 3.53E+08 | 3.55E+08 | 3.75E+08 | 4.06E+08 | 4.84E+08 | 4.22E+08 | 0.84 | 0.138 | 55 |
| Q9D823 | 60S ribosomal protein L37 | Rpl37 | 11.078 | 500,000 | 1,372,000 | 3,744,100 | 1.87E+06 | 2,985,600 | 2.45E+07 | 500,000 | 9.33E+06 | 0.20 | 0.387 | 7 |
LFQ, label-free quantitation; Ct, control group.
mit, mitochondrial.