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. 2009 Jun 10;29(23):7519–7525. doi: 10.1523/JNEUROSCI.0517-09.2009

Table 1.

Oligonucleotide sequences used in nested-PCR to generate partial sequences for X. unicolor and P. regius LWS, SWS1, and Rh1 cone opsin genes and full-length sequences for in vitro regeneration of sunbeam LWS, SWS1, and Rh1 visual pigments

Primer Sequence
AOASF1 5′-CGCGAGAGATACATNGTNRTNTGYAARCC-3′
AOASF2 5′-ATTTTAGAAGGTCTGCCRGWSNTCNTGYGG-3′
AOASR1 5′-ATTGGTCACCTCCTTYTCNGCYYTYTGNGT-3′
AOASR2 5′-CCCGGAAGACGTAGATGANNGGRTTRWANA-3′
DIAPLMF1 5′-AAGCGTATTYAYTTAYACCRACASCAACAA-3′
DIAPLMF2 5′-AGTGTCATCAACCAGWTCTYBGGSTAYTTC-3′
DIAPLMR1 5′-CATCCTBGACACYTCCYTCTCVGCCTTCTG-3′
DIAPLMR2 5′-CATCATCCACTTTYTTSCCRAASAGCTGCA-3′
DIAPS1F1 5′-TCCCATGTCCGGAGAVGAVGABTTYTACCT-3′
DIAPS1F2 5′-GGCCTTCGARCGHTACATYGTYATCTGCAA-3′
DIAPS1R1 5′-CACCACSACCATSCGVGASACCTCCCGCTC-3′
DIAPS1R2 5′-TTAGCTGGGGCYGACYTGRCTGGAGGACAC-3′
DIAPR1F1 5′-GTCAAAATTTCTAYRTBCCCWTKTCCAACA-3′
DIAPR1F2 5′-AATAGGATGCWRCWTYGARGGCTTCTTTGC-3′
DIAPR1R1 5′-ACAGTGCAGACAAGRYKYCCRTAGCAGAAG-3′
DIAPR1R2 5′-ATTCTTTCCACARCARAGRGTBRTGATCAT-3′
PESBLWSF 5′-GCGCGAATTCCACCATGCAAACAAGGGGGAAAGAA-3′
PESBLWSR 5′-CGGCGTCGACGCTGCTGGCGATACAGAAGAGTT-3′
PESBSWS1F 5′-GCGCGAATTCCACCATGTCCGGAGAAGAGGACTTC-3′
PESBSWS1R 5′-CGGCGTCGACGCGCTCCTTGGAGAACCCGTGGT-3′
PESBRH1F 5′-GCGCGAATTCCACCATGAATGGAACAGAAGGGCTT-3′
PESBRH1R 5′- CGGCGTCGACGCGGCAGGGGAAACCTGACTTGT-3′