Skip to main content
. 2019 Jul 30;14(7):e0220518. doi: 10.1371/journal.pone.0220518

Table 9. KEGG enzyme activity codes for which significantly different numbers of associated differentially expressed genes were present in comparisons of ‘mirror image’ expression categories.

Tissue Expression category comparison1 Number of DEGs in each expression category Number of DEGs associated with KEGG enzyme activity codes in the contrasted expression categories
KEGG enzyme activity code DEGs P2
AR/TC-1_2 1 2 1 2
Shoot AR-uuu_ddd 105 166 EC:3.1.3.16—phosphatase 5 1 3.39E-02
AR-nun_ndn 319 404 EC:3.6.1.15—phosphatase 3 26 <1.00E-04
EC:3.6.1.3—adenylpyrophosphatase 1 15 1.50E-03
AR-nnu_nnd 1139 1276 EC:1.11.1.7—lactoperoxidase 4 21 1.89E-03
EC:3.6.1.15—phosphatase 17 50 2.70E-04
EC:3.6.1.3—adenylpyrophosphatase 12 35 2.87E-03
TC-nud_ndu 178 228 EC:3.6.1.15—phosphatase 2 12 2.73E-02
EC:3.6.1.3—adenylpyrophosphatase 0 10 3.08E-03
TC-nun_ndn 423 518 EC:3.6.1.15—phosphatase 4 18 1.51E-02
TC-nnu_nnd 866 872 EC:1.11.1.7—lactoperoxidase 3 14 9.34E-04
Root AR-nu_nd 314 528 EC:1.11.1.7—lactoperoxidase 3 21 9.68E-03
EC:4.1.1.2—decarboxylase 0 20 6.73E-04
AR-nuu_ndd 156 330 EC:1.11.1.7—lactoperoxidase 1 12 7.05E-02
EC:4.1.1.2—decarboxylase 0 18 1.25E-03
AR-nnu_nnd 1805 1761 EC:1.11.1.7—lactoperoxidase 9 44 <1.00E-04
EC:3.6.1.15—phosphatase 39 86 <1.00E-04
EC:3.6.1.3—adenylpyrophosphatase 33 63 1.28E-03
TC-nnu_nnd 1274 1625 EC:3.1.3.16—phosphatase 18 9 1.93E-02
EC:1.11.1.7—lactoperoxidase 6 45 <1.00E-04
EC:3.6.1.15—phosphatase 28 87 <1.00E-04
EC:3.6.1.3—adenylpyrophosphatase 21 65 1.60E-04

1Abbreviated expression categories. u = up; d = down; n = ns.

2P-values were calculated using Fisher’s Exact Test comparing the total number of DEGs in each of expression categories 1 and 2 with the corresponding values associated with the KEGG enzyme activity codes.