Table 1:
Identification method | Taxonomic expertise | Identify specific taxa | Identify broad range of taxa | Throughput level | Time per identification |
---|---|---|---|---|---|
Morphological | |||||
Microscopic examination | High | High* | High* | Low | Moderate |
Molecular | |||||
PCR–restriction fragment length polymorphism | Low | Moderate | Low | Moderate | Moderate |
DNA barcoding | Low | High | High | Low | Moderate |
Quantitative PCR/droplet digital PCR | Low | High | Low | High | Low |
Loop-mediated isothermal amplification | Low | High | Low | Low | Low |
Metabarcoding | Low | High | High | Very high | Low |
*This morphological identification score assumes a high level of taxonomic knowledge and a low human error rate.