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. 2019 Jul 30;10:3404. doi: 10.1038/s41467-019-11337-z

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — Increased speed of pLink 2 over Kojak on the Synthetic-BS3 dataset. a pLink 2 achieved a 3.9 times speed-up when searching against the E. coli entrapment database. The horizontal axis is the number of top-k scored single peptides kept in Kojak, starting from its default value of 250. Speed-up was measured when the sensitivity of Kojak remained steady. b, c Similar to a, but against b the worm and c the human entrapment database, respectively