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. 2019 Jul 24;10:1706. doi: 10.3389/fmicb.2019.01706

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Copyright © 2019 Malmuthuge and Griebel.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Colonization of the adjacent intact intestine and subsections of the surgically isolated intestinal segment during the first 2 months of life. (A) Microbial profiling of intestinal samples collected from adjacent intact intestine (N) on day 1 (N1), 7 (N7) and 56 (N56) post-partum. (B) Microbial profiling of the surgically isolated intestinal segment (S) that remained isolated on days 1 (S1), 7 (S7), and 56 (S56) post-partum. (C) Microbial profiling of the isolated intestinal segment subsection that were reconnected to the adjacent small intestine on day 1 post-partum and then sampled on day 7 (S1R7) and 56 (S1R56) post-partum. A second subsection of the intestinal segment was reconnected to the adjacent small intestine on day 7 post-partum and then sampled on day 56 (S7R56) post-partum. Each bar represents a sample collected from an individual animal (92, 95, 97, 99, 101, 105) at the time points indicated.