Table 4.
GSEA of Genes Affected by SE in Control vs Astro-D2KO Mice
| Gene Ontology | Description | Total No. Genes in Set | ES | NES | Nominal P | FDR q Value |
|---|---|---|---|---|---|---|
| Enriched in control-SE animals | ||||||
| GO:0006979 | Response to oxidative stress | 40 | −0.39 | −1.35 | 0 | 0.276 |
| GO:0019932 | Second-messenger–mediated signaling | 140 | −0.47 | −1.34 | 0 | 0.276 |
| GO:0007267 | Cell–cell signaling | 369 | −0.42 | −1.35 | 0 | 0.277 |
| GO:0045597 | Positive regulation of cell differentiation | 24 | −0.68 | −1.36 | 0 | 0.279 |
| GO:0009991 | Response to extracellular stimulus | 33 | −0.65 | −1.37 | 0 | 0.281 |
| GO:0019725 | Cellular homeostasis | 133 | −0.48 | −1.37 | 0 | 0.281 |
| GO:0009887 | Organ morphogenesis | 139 | −0.43 | −1.37 | 0 | 0.282 |
| GO:0048878 | Chemical homeostasis | 139 | −0.48 | −1.37 | 0 | 0.284 |
| GO:0008284 | Positive regulation of cell proliferation | 128 | −0.49 | −1.38 | 0 | 0.291 |
| GO:0030234 | Enzyme regulator activity | 294 | −0.36 | −1.38 | 0 | 0.292 |
| Enriched in AstroD2KO-SE animals | ||||||
| GO:0016772 | Transferase activity transferring phosphorus-containing groups | 392 | −0.26 | −1.26 | 0 | 0.366 |
| GO:0004672 | Protein kinase activity | 261 | −0.31 | −1.3 | 0 | 0.371 |
| GO:0051239 | Regulation of multicellular organismal process | 139 | −0.45 | −1.29 | 0 | 0.373 |
| GO:0016301 | Kinase activity | 340 | −0.27 | −1.29 | 0 | 0.376 |
| GO:0016773 | Phosphotransferase activity alcohol group as acceptor | 309 | −0.29 | −1.31 | 0 | 0.38 |
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | 72 | −0.37 | −1.34 | 0 | 0.381 |
| GO:0009607 | Response to biotic stimulus | 95 | −0.55 | −1.34 | 0 | 0.384 |
| GO:0031667 | Response to nutrient levels | 29 | −0.64 | −1.32 | 0 | 0.385 |
| GO:0006937 | Regulation of muscle contraction | 17 | −0.58 | −1.3 | 0 | 0.385 |
| GO:0008283 | Cell proliferation | 470 | −0.44 | −1.31 | 0 | 0.387 |
Comparison of [control (n = 4) vs control-SE (n = 4)] vs [Astro-D2KO (n = 4) vs Astro-D2KO-SE (n = 4)] animals at a nominal P < 0.01.
Abbreviations: ES, enrichment score; NES, normalized enrichment score.