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. Author manuscript; available in PMC: 2019 Aug 1.
Published in final edited form as: J Proteome Res. 2018 May 8;17(6):2205–2215. doi: 10.1021/acs.jproteome.8b00165

Figure 5.

Figure 5.

Accuracy of tandem-mass-tag (TMT) quantitation and reproducibility of sample digestion based by peptide aliquots and protein aliquots protein ratios, respectively. Box plots were generated for reported protein ratios using either a peptide aliquot channel (A) and protein aliquot channel (B) for data normalization. (C) Influence of ion intensity on reporter tag accuracy. Data plotted is from Replicate #1, Fraction #1.