Table 2.
Comparison of the extent of LBD closure in wild-type and T686 mutant protomers
Wild type |
T686A |
T686S |
|||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Glu |
Quis |
Glu |
Quis |
Glu |
|||||||
A | B | C | A | B | A | A | A | B | C | D | |
wtApo(A) | 19.1 | 21.1 | 20.9 | 20.4 | 21.3 | 22.5 | 22.0 | 22.7 | 21.7 | 6.9 | 8.7a |
(5.2) | (6.3) | (6.3) | (5.6) | (5.8) | (6.4) | (6.3) | (6.7) | (6.3) | (2.2) | (2.7) | |
wtApo(B) | 11.6 | 17.9 | 17.9 | 17.6 | 18.5 | 19.6 | 18.9 | 20.1 | 18.8 | 4.2 | 5.3a |
(3.4) | (4.2) | (4.4) | (3.8) | (4.0) | (4.3) | (4.3) | (5.0) | (5.0) | (0.7) | (2.0) |
Angles of rotation (in degrees) and the linear displacement (in angstroms) of the linker residue G630 for glutamate- and quisqualate-bound GluR2-wt and T686 mutant protomers. For each cell in the table, the displacement values are in parentheses. Values are referenced to protomers A and B in the published wild-type GluR2–S1S2J apo structure (Armstrong and Gouaux, 2000). The wild-type glutamate- and quisqualate-bound structures were published previously (Armstrong and Gouaux, 2000; Jin et al., 2002). Rotation angles were measured with the analysis program DynDom (http://www.sys.uea.ac.uk/dyndom/). Protomers C and D in the T686S structure did not contain detectable electron density for bound glutamate.
aFor protomer D, residues 640–700 had poor electron density and were excluded before the rotation angle was measured.