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. 2006 Oct 18;26(42):10658–10666. doi: 10.1523/JNEUROSCI.2609-06.2006

Table 1.

Primer pairs used for detection of TRPC channel transcripts

Channel subtype Primer sequence Expected size Intron in amplicon Gene location
TRPC1–5′ GGGTCCATTACAGATTTCAA 207 bp 1 chr 3
TRPC1–3′ AAGCAGGTGCCAATGAACGA
TRPC3–5′ GTATGTGGACAGTTACGTC 553 bp 2 chr 4
TRPC3–3′ CTACATCACTGTCATCCTC
TRPC4–5′ TGGGATGGCGGACTTCAG 391 bp 1 chr 13
TRPC4–3′ ATGCCTTTGCAGGTTAACCC
TRPC5–5′ GTGGAGAAGGGGGACTATGC 525 bp 1 chr X
TRPC5–3′ CCTCACTTGATAAGGCAATG
TRPC6–5′ CTCTGAAGGTCTTTATGC 428 bp 1 chr 11
TRPC6–3′ TCATCCTCAATTTCCTGG
TRPC7–5′ AACCCAGCGTTTACAACG 361 bp 1 chr 5
TRPC7–3′ ATGAGGCACATCTTGATTC

Primers were designed according to sequences available from the European Molecular Biology Laboratory database. At least one intron region was included in the amplicons to avoid amplification of genomic DNA and unprocessed RNA. Both 5′ primers and 3′ primers are written in 5′ to 3′ direction. chr, Chromosome.

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