TABLE 2.
HML-6 genomic context of insertion into human coding and noncoding genes
| Sequence | Type | Gene name | Gene type | Description |
|---|---|---|---|---|
| 1p21.1(+) | 1a | RP5-936J12.1(–) | Known lincRNA | |
| 1q25.2(–) | 1a | AXDND1(+) | Known protein coding | Axonemal dynein light chain domain containing protein 1 |
| 2q14.23(–) | 2 | MYO7B(+) | Known protein coding | Myosin VIIB |
| 4p14(–) | 1b | UGDH-AS1(+) | Known antisense | UGDH antisense RNA 1 |
| 4q21.1(–) | 1a | CCNG2(+) | Known protein coding | Cyclin G2 |
| 6p21.32b(–) | 1a | HLA-DRB6(–) | Known transcribed unprocessed pseudogene | Major histocompatibility complex, class II, DR β6 (pseudogene) |
| 11p15.4(–) | 1a | RP11-494M8.4(–) | Known lincRNA | |
| 11q12.3b(+) | 1a | RP11-703H8.9(–) | Known antisense | |
| 14q12(+) | 1a | CTD-2591A6.2(+) | Known lincRNA | |
| 16p11.2(–) | 1b | FLJ90415(–) | Known protein coding | Zinc finger protein 689 |
| 17q25.1(+) | 1b | CD300D(–); FLJ31882(+) | Known protein coding; known antisense | Immune receptor expressed on myeloid cells 1 |
| 19p13.2a(–) | 1a | CTC-543D15.3(+) | Known lincRNA | |
| 19p13.2b(–) | 1a | DKFZp571K0837(+) | Known protein coding | Zinc finger protein 439 |
| 19p12c(+) | 1a | ZNF676(–) | Known protein coding | Zinc finger protein 676 |
| 19q13.41a(–) | 1a | FPR3(+) | Known protein coding | Formyl peptide receptor 3 |
| 19q13.41b(+) | 1a | ZNF350(–) | Known protein coding | Zinc finger protein 350 |
| 19q13.41c(–) | 1a | ZNF528(+) | Known protein coding | Zinc finger protein 528 |
| 19q13.41d(–) | 1a | ZNF578 (+) | Known protein coding | Zinc finger protein 578 |
| 19q13.41e(–) | 1b | ZNF702P(–) | Known transcribed processed pseudogene | Zinc finger protein 702 |
| 19q13.43b(+) | 1b | ERVK3-1 | Known protein coding | Endogenous retrovirus group K3 member 1 |